HHsearch alignment for GI: 254780709 and conserved domain: PRK05291

>PRK05291 trmE tRNA modification GTPase TrmE; Reviewed.
Probab=97.80  E-value=0.00025  Score=50.65  Aligned_cols=162  Identities=21%  Similarity=0.299  Sum_probs=88.7

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf             99998785201001210001366741231135444442478999999985226742677434512456889999975303
Q gi|254780709|r   87 DVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTS  166 (321)
Q Consensus        87 ~l~~~L~~~L~~~~~~~~~~~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~  166 (321)
T Consensus       195 ~l~~~i~~ll~~~~~g~~l---~~G~~v~i~G~PN~GKSSL~N~L~------~~drAIVS--------------------  245 (445)
T PRK05291        195 ELIAELEKLLASAKQGELL---REGLKVVIAGRPNVGKSSLLNALL------GEERAIVT--------------------  245 (445)
T ss_pred             HHHHHHHHHHHHHHHHHHH---HCCCEEEEECCCCCCHHHHHHHHH------CCCCEEEC--------------------
T ss_conf             9999999999998741786---359869988999876899999985------78746731--------------------


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHH-HHHHCCCEEEEECCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH
Q ss_conf             5321223586612454228999-965148759986543-33211577899998998763022234301123102335225
Q gi|254780709|r  167 ADFVCSEIGSDAAALAYEAFKQ-AQAKKVDVLIIDTAG-RLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN  244 (321)
Q Consensus       167 v~~~~~~~~~dp~~v~~~a~~~-a~~~~~DvvliDTAG-R~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~  244 (321)
T Consensus       246 -----~ipGT-----TRD~ie~~l~l~G~~v~l~DTAGiR~t~d--~IE-~~GI~ra~~~~~~--ADlil~v~D~s~~~~  310 (445)
T PRK05291        246 -----DIAGT-----TRDVIEEHINLDGIPLRLIDTAGIRETED--EVE-KIGIERSRKAIEE--ADLVLLVLDASEPLT  310 (445)
T ss_pred             -----CCCCC-----CCCEEEEEEEECCEEEEEEECCCCCCCCC--HHH-HHHHHHHHHHHHH--CCEEEEEEECCCCCC
T ss_conf             -----89997-----40402236899998999998997665574--588-9999999999983--999999987998887


Q ss_pred             HHHHHHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE--CCCCCCCCCCCC
Q ss_conf             778999876435--8976999654578706999999999769889997--589813255577
Q gi|254780709|r  245 ALRQVEMFHAVA--GTTGLIMTKMDGTARGGGLIPIVVTHKIPVYFLG--VGEGINDLEPFV  302 (321)
Q Consensus       245 ~~~~a~~F~~~~--~~~g~I~TKlD~ta~~G~~ls~~~~~~~Pi~fig--~Ge~i~Dl~~f~  302 (321)
T Consensus       311 ~~~~~-~~-~~~~~~~~i~V~NK~DL~~~--------~~~~~~~i~iSak~g~Gi~~L~~~i  362 (445)
T PRK05291        311 EEDKE-IL-EEFKNKPVIVVLNKADLTGE--------KIDGLPVIRISAKTGEGIDELEEAL  362 (445)
T ss_pred             CCHHH-HH-HHCCCCCEEEEEEHHHCCCC--------CCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf             22599-99-85179987999851204665--------3478975999837886999999999