HHsearch alignment for GI: 254780709 and conserved domain: PRK05564

Probab=96.88  E-value=0.0041  Score=42.18  Aligned_cols=114  Identities=16%  Similarity=0.286  Sum_probs=61.7

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHHHHH-CC-C-CEEEEECCCC--CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf             667412311354444424789999999852-26-7-4267743451--24568899999753035321223586612454
Q gi|254780709|r  108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSD-AG-L-KVMLAAGDTF--RSAAIDQLKIWADRTSADFVCSEIGSDAAALA  182 (321)
Q Consensus       108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~-~g-~-kV~lva~Dtf--R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~  182 (321)
T Consensus        23 ~rl~HAyLF~Gp~G~GK~~~A~~~A~~ll~~~~~~~~~D~~~~~~~~~~~I~vd~IR~l~~~~~~~--------------   88 (313)
T PRK05564         23 GKFSHASLIVGEDGIGKSILAKEIANKILGKSEQREYVDIIEYKPINKKSIGVDDIRNIIEEVNKK--------------   88 (313)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC--------------
T ss_conf             998750432799985099999999999828997788986588633225699989999999998408--------------


Q ss_pred             HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf             22899996514875998654333211577899998998763022234301123102335225778999
Q gi|254780709|r  183 YEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVE  250 (321)
Q Consensus       183 ~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~  250 (321)
T Consensus        89 ------p~~g~~KV~II~~ae~m~~~Aa---------NALLKtLEEPP~~t~fIL~t~~~~~lLpTI~  141 (313)
T PRK05564         89 ------PYEGDKKVIIIYKSEKMTEQAQ---------NAFLKTIEEPPKGVFIILLCENLEQILDTIK  141 (313)
T ss_pred             ------CCCCCCEEEEECCHHHHCHHHH---------HHHHHCCCCCCCCEEEEEEECCHHHCCCHHH
T ss_conf             ------6258956999807777589999---------9984550368998589986498354757787