HHsearch alignment for GI: 254780709 and conserved domain: PRK05858

Probab=95.68  E-value=0.22  Score=30.01  Aligned_cols=118  Identities=15%  Similarity=0.158  Sum_probs=66.0

Q ss_pred             CHHHHHHHHHHHHHHHCCCCCCCCCCCCC---------C--CCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             98999999999878520100121000136---------6--741231135444442478999999985226742677434
Q gi|254780709|r   80 SVQRVLYDVSELIHKMLMPLSKPFNWDFS---------H--RPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGD  148 (321)
Q Consensus        80 ~~~~i~~~l~~~L~~~L~~~~~~~~~~~~---------~--~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~D  148 (321)
T Consensus       136 ~~~~~~~~l~~A~~~A~~~~~GPV~l~iP~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~L~~AkrPvii~G~g  215 (543)
T PRK05858        136 SAENAGRLVDQALQAAVSAHSGVVFVDFPMDHAFSMASDNGRPGALTELPAGPEPDGDALDRAAGLLSTAQRPVIMAGTN  215 (543)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             99999999999999986289973999936666523044456776556678889999999999999998279978996864


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCC------CCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             512456889999975303532122358------661245422899996514875998
Q gi|254780709|r  149 TFRSAAIDQLKIWADRTSADFVCSEIG------SDAAALAYEAFKQAQAKKVDVLII  199 (321)
Q Consensus       149 tfR~aA~eQL~~~a~~~~v~~~~~~~~------~dp~~v~~~a~~~a~~~~~Dvvli  199 (321)
T Consensus       216 v~~~~a~~~l~~lae~lg~Pv~tt~~gkg~~p~~hpl~~~-~~~~~-~l~~aDlil~  270 (543)
T PRK05858        216 VWWGHAEAALLRLAEELHIPVLMNGMARGVVPADHPLAFS-RARSK-ALGEADVALV  270 (543)
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHH-HHHHH-HHCCCCEEEE
T ss_conf             2233339999999998699778755557768887704565-78998-8556998999