HHsearch alignment for GI: 254780709 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.08 E-value=0.00086 Score=46.91 Aligned_cols=118 Identities=22% Similarity=0.211 Sum_probs=58.8
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC----CCCCCCHHHHHH
Q ss_conf 6741231135444442478999999985226742677434512456889999975303532122----358661245422
Q gi|254780709|r 109 HRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCS----EIGSDAAALAYE 184 (321)
Q Consensus 109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~----~~~~dp~~v~~~ 184 (321)
T Consensus 37 ri~HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~-----C~~I~~g~~~DViEiDaAs~~gVddIRel~e 111 (462)
T PRK06305 37 RAAHAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAI-----CKEISSGTSLDVIEIDGASHRGIEDIRQINE 111 (462)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH-----HHHHHCCCCCCEEEECCCCCCCHHHHHHHHH
T ss_conf 97623430389985999999999999679999888898876688-----8998638999868643553446689999997
Q ss_pred HHHHHH-HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf 899996-514875998654333211577899998998763022234301123102335
Q gi|254780709|r 185 AFKQAQ-AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATT 241 (321)
Q Consensus 185 a~~~a~-~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~ 241 (321)
T Consensus 112 ~v~~~P~~~~yKVyIIDEvhmLs~~Af--NALLK-------tLEEPP~~v~FIL-aTT 159 (462)
T PRK06305 112 TVLFTPSKSQYKIYIIDEVHMLTKEAF--NSLLK-------TLEEPPQHVKFFL-ATT 159 (462)
T ss_pred HHCCCCCCCCEEEEEEECHHHCCHHHH--HHHHH-------HHHCCCCCEEEEE-EEC
T ss_conf 710088677505999815211799999--99999-------8618987749999-818