HHsearch alignment for GI: 254780709 and conserved domain: PRK06647

>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.62  E-value=0.00084  Score=47.00  Aligned_cols=120  Identities=17%  Similarity=0.192  Sum_probs=59.3

Q ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHH
Q ss_conf             67412311354444424789999999852-2674267743451245688999997530353212235866-124542289
Q gi|254780709|r  109 HRPHVILVVGVNGVGKTTVIGKLSKKMSD-AGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSD-AAALAYEAF  186 (321)
Q Consensus       109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~-~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~d-p~~v~~~a~  186 (321)
T Consensus        36 rl~HAyLFsGprG~GKTt~ArilAk~LnC~~~~~--~~PCg~C-----~sC~~i~~g~~~DviEidaasn~~VddIR~l~  108 (560)
T PRK06647         36 KIANAYIFSGPRGVGKTSSARAFARCLNCVNGPT--IMPCGEC-----FSCKSIDNDSSLDVIEIDGASNTSVQDVRQIK  108 (560)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC--CCCCCCC-----HHHHHHHCCCCCCEEEECCCCCCCHHHHHHHH
T ss_conf             9774366328998789999999999965999999--8888788-----78888745999875764364548889999999


Q ss_pred             HHHH----HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH
Q ss_conf             9996----514875998654333211577899998998763022234301123102335225
Q gi|254780709|r  187 KQAQ----AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN  244 (321)
Q Consensus       187 ~~a~----~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~  244 (321)
T Consensus       109 e~v~~~P~~~~yKV~IIDEahmLt~~A~--NALLK-------tLEEPP~~~~FILaTte~~K  161 (560)
T PRK06647        109 EEIMFPPASSRYRVYIIDEVHMLSNSAF--NALLK-------TIEEPPPYIVFIFATTEVHK  161 (560)
T ss_pred             HHHCCCCCCCCEEEEEECCHHHCCHHHH--HHHHH-------HHHCCCCCEEEEEECCCHHH
T ss_conf             9863287668706999646565599999--99999-------86348875599997799476