HHsearch alignment for GI: 254780709 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.62 E-value=0.00084 Score=47.00 Aligned_cols=120 Identities=17% Similarity=0.192 Sum_probs=59.3
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHH
Q ss_conf 67412311354444424789999999852-2674267743451245688999997530353212235866-124542289
Q gi|254780709|r 109 HRPHVILVVGVNGVGKTTVIGKLSKKMSD-AGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSD-AAALAYEAF 186 (321)
Q Consensus 109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~-~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~d-p~~v~~~a~ 186 (321)
T Consensus 36 rl~HAyLFsGprG~GKTt~ArilAk~LnC~~~~~--~~PCg~C-----~sC~~i~~g~~~DviEidaasn~~VddIR~l~ 108 (560)
T PRK06647 36 KIANAYIFSGPRGVGKTSSARAFARCLNCVNGPT--IMPCGEC-----FSCKSIDNDSSLDVIEIDGASNTSVQDVRQIK 108 (560)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC--CCCCCCC-----HHHHHHHCCCCCCEEEECCCCCCCHHHHHHHH
T ss_conf 9774366328998789999999999965999999--8888788-----78888745999875764364548889999999
Q ss_pred HHHH----HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH
Q ss_conf 9996----514875998654333211577899998998763022234301123102335225
Q gi|254780709|r 187 KQAQ----AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN 244 (321)
Q Consensus 187 ~~a~----~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~ 244 (321)
T Consensus 109 e~v~~~P~~~~yKV~IIDEahmLt~~A~--NALLK-------tLEEPP~~~~FILaTte~~K 161 (560)
T PRK06647 109 EEIMFPPASSRYRVYIIDEVHMLSNSAF--NALLK-------TIEEPPPYIVFIFATTEVHK 161 (560)
T ss_pred HHHCCCCCCCCEEEEEECCHHHCCHHHH--HHHHH-------HHHCCCCCEEEEEECCCHHH
T ss_conf 9863287668706999646565599999--99999-------86348875599997799476