HHsearch alignment for GI: 254780709 and conserved domain: PRK06871

Probab=95.36  E-value=0.051  Score=34.48  Aligned_cols=129  Identities=16%  Similarity=0.128  Sum_probs=65.2

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHH
Q ss_conf             6674123113544444247899999998522674267743451245688999997530353212235866-124542289
Q gi|254780709|r  108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSD-AAALAYEAF  186 (321)
Q Consensus       108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~d-p~~v~~~a~  186 (321)
T Consensus        20 ~r~~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~-~~~Cg~C~s---C~l~~~g~HPD~~~i~~~~~k~I~vd~IR~l~   95 (324)
T PRK06871         20 GRGHHALLFKADSGLGTEQLIRALAQWLMCQAPGD-EQPCGQCHS---CHLFQAGNHPDFHILEPIDGKDIGVDQVREIN   95 (324)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC-CCCCCCCHH---HHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf             99543787689999789999999999982899999-998888989---99997389998799846788878899999999


Q ss_pred             HHH----HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf             999----651487599865433321157789999899876302223430112310233522577899
Q gi|254780709|r  187 KQA----QAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQV  249 (321)
Q Consensus       187 ~~a----~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a  249 (321)
T Consensus        96 ~~~~~~~~~g~~KV~iI~~ae~m~~~Aa---------NALLKtLEEPp~~~~fiL~t~~~~~ll~TI  153 (324)
T PRK06871         96 EKVSQFAQQGGNKVVYIQGAERLTEAAA---------NALLKTLEEPRPNTYFLLQADLSASLLATI  153 (324)
T ss_pred             HHHHHCCCCCCCEEEEECCHHHHHHHHH---------HHHHHHHCCCCCCEEEEEEECCCCCCCCHH
T ss_conf             9986462205966999758888579999---------999998338987838999878701032408