HHsearch alignment for GI: 254780709 and conserved domain: PRK06964
>PRK06964 DNA polymerase III subunit delta'; Validated.
Probab=95.39 E-value=0.074 Score=33.35 Aligned_cols=130 Identities=16% Similarity=0.152 Sum_probs=63.8
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH--HHCCCCCCCC------------
Q ss_conf 66741231135444442478999999985226742677434512456889999975--3035321223------------
Q gi|254780709|r 108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWAD--RTSADFVCSE------------ 173 (321)
Q Consensus 108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~--~~~v~~~~~~------------ 173 (321)
T Consensus 18 ~rl~HA~Lf~Gp~G~Gk~~lA~~~A~~llC~~~~~~~~~Cg~C~s-----C~~~~~~~HPD~~~i~Pe~~~~~~~~~~~~ 92 (342)
T PRK06964 18 ARWPHALLLHGQAGIGKLAFAQHLAQGLLCETPQPNGEPCGTCAA-----CTWFAQGNHPDYRIVRPEALAAEAPGAADD 92 (342)
T ss_pred CCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH-----HHHHHCCCCCCEEEECCCHHCCCCCCCCCH
T ss_conf 871305765799986799999999999838999988897867777-----888862799974553400210223332100
Q ss_pred --------CC------C--CCHHHHHHHHHHHH----HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf --------58------6--61245422899996----5148759986543332115778999989987630222343011
Q gi|254780709|r 174 --------IG------S--DAAALAYEAFKQAQ----AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSV 233 (321)
Q Consensus 174 --------~~------~--dp~~v~~~a~~~a~----~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~ 233 (321)
T Consensus 93 ~~~~~~~~~~~~~~~~~~~I~idqiR~l~~~l~~~~~~g~~kVviI~~Ae~mn~~aa--Nal-------LK~LEEPp~~~ 163 (342)
T PRK06964 93 AKAADADEGGKKTRAPSKEIKIEQVRALLDFCGVGSHRGGARVVVLYPAEALNVAAA--NAL-------LKTLEEPPPGV 163 (342)
T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHH--HHH-------HHHHCCCCCCE
T ss_conf 101112221012356556454999999999970075458844999827787389999--999-------99723798784
Q ss_pred EEECCCCCCHHHHHHHHH
Q ss_conf 231023352257789998
Q gi|254780709|r 234 LQVLDATTGQNALRQVEM 251 (321)
Q Consensus 234 ~lVlda~~gq~~~~~a~~ 251 (321)
T Consensus 164 ~~iL~~~~~~~llpTI~S 181 (342)
T PRK06964 164 VFLLVSARIDRLLPTILS 181 (342)
T ss_pred EEEEEECCHHHCCHHHHH
T ss_conf 899986992548368876