HHsearch alignment for GI: 254780709 and conserved domain: PRK07429
>PRK07429 phosphoribulokinase; Provisional.
Probab=96.12 E-value=0.0078 Score=40.21 Aligned_cols=110 Identities=25% Similarity=0.344 Sum_probs=70.8
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH----------------HH------HHHHHHHH--
Q ss_conf 3667412311354444424789999999852267426774345124----------------56------88999997--
Q gi|254780709|r 107 FSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRS----------------AA------IDQLKIWA-- 162 (321)
Q Consensus 107 ~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~----------------aA------~eQL~~~a-- 162 (321)
T Consensus 4 m~~rP~IIGIAGgSGSGKTTv~r~I~~~fg~--~~VtvI~~DdYhk~dr~~r~~~~~t~lhP~And~dLl~e~L~~Lk~G 81 (331)
T PRK07429 4 MPDRPVIIGVAGDSGCGKSTFLRRLADLFGE--ELVTVICLDDYHSLDRKQRKEIGITALDPRANNFDLMYEQLKALKTG 81 (331)
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHCHHHHHHHHHHHHCC
T ss_conf 9999989998578877899999999998388--87799947867778878898718987896400599999999999859
Q ss_pred HHHCCCCCCCCCCC-C------CHHH-HHHHHHHH----HHHCCCE-EEEECCC--------------CCCCHHHHHHHH
Q ss_conf 53035321223586-6------1245-42289999----6514875-9986543--------------332115778999
Q gi|254780709|r 163 DRTSADFVCSEIGS-D------AAAL-AYEAFKQA----QAKKVDV-LIIDTAG--------------RLHNNSILMAGI 215 (321)
Q Consensus 163 ~~~~v~~~~~~~~~-d------p~~v-~~~a~~~a----~~~~~Dv-vliDTAG--------------R~~~~~~lm~EL 215 (321)
T Consensus 82 k~I~~PvYdh~tg~~~~~~~I~P~~vIIvEGLh~L~~~~lR~l~DlKIFVD~d~diR~~rRI~RDv~ERG~s~E~Vl~qi 161 (331)
T PRK07429 82 QPILKPIYNHETGKIDPPEYIKPNKIVVVEGLHPLYDERVRDLYDFKVYLDPPDEVKIAWKIKRDMAERGHTYEDVLAEI 161 (331)
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCEEEEECCHHCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 97256523564787788666068867999161212879899754937996487889999988877866189999999999
Q ss_pred HHH
Q ss_conf 989
Q gi|254780709|r 216 GKM 218 (321)
Q Consensus 216 ~ki 218 (321)
T Consensus 162 ~~R 164 (331)
T PRK07429 162 EKR 164 (331)
T ss_pred HHC
T ss_conf 851