HHsearch alignment for GI: 254780709 and conserved domain: PRK07764
>PRK07764 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.98 E-value=0.017 Score=37.74 Aligned_cols=118 Identities=24% Similarity=0.239 Sum_probs=60.1
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHHHHH-HCCCC-EEEEECCCCCHHHHHHHHHHHHHHCCCCCCC----CCCCCCHHHH
Q ss_conf 6741231135444442478999999985-22674-2677434512456889999975303532122----3586612454
Q gi|254780709|r 109 HRPHVILVVGVNGVGKTTVIGKLSKKMS-DAGLK-VMLAAGDTFRSAAIDQLKIWADRTSADFVCS----EIGSDAAALA 182 (321)
Q Consensus 109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~-~~g~k-V~lva~DtfR~aA~eQL~~~a~~~~v~~~~~----~~~~dp~~v~ 182 (321)
T Consensus 35 ri~HAYLFsGprG~GKTt~ARilAkaLNC~~~~~~~PCg~C~sC~-----~i~~g~-~~~~DviEiDAAS~~gVddiReL 108 (775)
T PRK07764 35 RINHAYLFSGPRGCGKTSSARILARSLNCAQGPTSTPCGVCDSCV-----ALAPGG-PGSLDVVEIDAASHGGVDDAREL 108 (775)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-----HHHCCC-CCCCCEEEECCCCCCCHHHHHHH
T ss_conf 976337623788878889999999996689999989888876378-----886389-88886687315655688999999
Q ss_pred HHHHHHHH-HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf 22899996-5148759986543332115778999989987630222343011231023352
Q gi|254780709|r 183 YEAFKQAQ-AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTG 242 (321)
Q Consensus 183 ~~a~~~a~-~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~g 242 (321)
T Consensus 109 ~e~~~y~P~~~ryKVyIIDEaHmls~~a--fNALLK-------tLEEPP~hvvFIl-aTTe 159 (775)
T PRK07764 109 RERAFFAPAQSRYRIFIIDEAHMVTTAG--FNALLK-------IVEEPPEHLIFIF-ATTE 159 (775)
T ss_pred HHHCCCCCCCCCEEEEEEECHHHHCHHH--HHHHHH-------HHCCCCCCEEEEE-ECCC
T ss_conf 9854768767863599985354407999--999988-------6227864627999-5487