HHsearch alignment for GI: 254780709 and conserved domain: PRK08233

Probab=97.22  E-value=0.002  Score=44.39  Aligned_cols=84  Identities=23%  Similarity=0.381  Sum_probs=51.9

Q ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             674123113544444247899999998522674267743451-2456889999975303532122358661245422899
Q gi|254780709|r  109 HRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTF-RSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFK  187 (321)
Q Consensus       109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~Dtf-R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~  187 (321)
T Consensus         1 kkp~IIgIaGgSgSGKTtla~~l~~~l~~---~~-~~~~D~y~~~~~~~~~~~~~~~~~-~~--d~--~d~~~-l~~~l~   70 (182)
T PRK08233          1 KKTKIITIAAVSGGGKTTLTERLTHKLKN---SK-ALYFDRYDFDNCPEDICKWIDDGA-NY--SE--WVLTP-LIKDIQ   70 (182)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHCCC---CE-EEEECCCCCCCCHHHHHHHHCCCC-CC--CH--HHHHH-HHHHHH
T ss_conf             99889999688867899999999997467---75-899666555468788998740677-86--66--66999-999999


Q ss_pred             HHHH-HCCCEEEEECC
Q ss_conf             9965-14875998654
Q gi|254780709|r  188 QAQA-KKVDVLIIDTA  202 (321)
Q Consensus       188 ~a~~-~~~DvvliDTA  202 (321)
T Consensus        71 ~l~~~~~~d~iIvEgi   86 (182)
T PRK08233         71 ELIAKSNVDYIIVDYP   86 (182)
T ss_pred             HHHCCCCCCEEEEEEE
T ss_conf             9855998728999644