HHsearch alignment for GI: 254780709 and conserved domain: PRK08699

Probab=96.28  E-value=0.016  Score=38.08  Aligned_cols=130  Identities=18%  Similarity=0.181  Sum_probs=63.4

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC-----CCCCCCHHHH
Q ss_conf             66741231135444442478999999985226742677434512456889999975303532122-----3586612454
Q gi|254780709|r  108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCS-----EIGSDAAALA  182 (321)
Q Consensus       108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~-----~~~~dp~~v~  182 (321)
T Consensus        18 ~rl~HA~L~~Gp~G~Gk~~~A~~~A~~llC~~~~~~~~~Cg~C~sC~---~~~~g~HPD~~~i~p~~~~~~~g~~~~~I~   94 (325)
T PRK08699         18 ERRPNAWLFVGKKGTGKTAFARFAAKALLCETPAPGCKPCGECMSCH---LFGQGSHPDFYEITPLADEPENGRKLLQIK   94 (325)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH---HHHCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf             45011797579999789999999999982899988899898888899---986599999688513445300166556676


Q ss_pred             HHHHHH----HH----HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf             228999----96----51487599865433321157789999899876302223430112310233522577899
Q gi|254780709|r  183 YEAFKQ----AQ----AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQV  249 (321)
Q Consensus       183 ~~a~~~----a~----~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a  249 (321)
T Consensus        95 idqiR~l~~~~~~~~~~~~~kV~ii~~ae~mn~~aa--NaLLK-------~LEEPp~~~~fiL~t~~~~~llpTI  160 (325)
T PRK08699         95 IDAVREIIDNVYLTSVRGGLRVILIHPAESMNVQAA--NSLLK-------VLEEPPPQVVFLLVSHAADKVLPTI  160 (325)
T ss_pred             HHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCHHHH--HHHHH-------HHCCCCCCEEEEEEECCHHHCCCHH
T ss_conf             999999999971086568946999857777589999--99999-------8417888848999879846462339