HHsearch alignment for GI: 254780709 and conserved domain: PRK12402

Probab=97.39  E-value=0.00044  Score=48.97  Aligned_cols=98  Identities=18%  Similarity=0.237  Sum_probs=51.4

Q ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCC--C-EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--HHHHH
Q ss_conf             67412311354444424789999999852267--4-2677434512456889999975303532122358661--24542
Q gi|254780709|r  109 HRPHVILVVGVNGVGKTTVIGKLSKKMSDAGL--K-VMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDA--AALAY  183 (321)
Q Consensus       109 ~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~--k-V~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp--~~v~~  183 (321)
T Consensus        35 ~~ph-lLf~GPpG~GKTt~A~~lA~~l~~~~~~~~~~~~nasd~~~~~~~-~i~~~--~~~~~~~~~~~~~~~~~~d~i~  110 (337)
T PRK12402         35 NLPH-LVVYGPSGSGKTAAVRALARELYGDPWENNFTYFNVSDFFDQGKK-YLVED--PRFAHFYDDPKRKYKSVIDNFK  110 (337)
T ss_pred             CCCE-EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCC-EEECC--CCHHHHHCCHHHCCCCHHHHHH
T ss_conf             9876-988892984899999999999679975678333116531135640-01016--6423442015332773789999


Q ss_pred             HHHHHH-H----HHCCCEEEEECCCCCCCHHH
Q ss_conf             289999-6----51487599865433321157
Q gi|254780709|r  184 EAFKQA-Q----AKKVDVLIIDTAGRLHNNSI  210 (321)
Q Consensus       184 ~a~~~a-~----~~~~DvvliDTAGR~~~~~~  210 (321)
T Consensus       111 ~ii~~~a~~~p~~~~~KiiIlDEad~lt~~Aq  142 (337)
T PRK12402        111 HILKEYASMRPLSADYKLILFDNAEALREDAQ  142 (337)
T ss_pred             HHHHHHHCCCCCCCCEEEEEEECCCCCCHHHH
T ss_conf             99999861488778804999707131799999