HHsearch alignment for GI: 254780709 and conserved domain: PRK13232
>PRK13232 nifH nitrogenase reductase; Reviewed.
Probab=98.23 E-value=3.2e-05 Score=56.96 Aligned_cols=161 Identities=19% Similarity=0.262 Sum_probs=88.5
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH------------HHHHHHHHHH------------HCCC
Q ss_conf 231135444442478999999985226742677434512456------------8899999753------------0353
Q gi|254780709|r 113 VILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAA------------IDQLKIWADR------------TSAD 168 (321)
Q Consensus 113 vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA------------~eQL~~~a~~------------~~v~ 168 (321)
T Consensus 3 ~iaiyGKGGVGKSTTt~NLaAALA~~GkkVL~IgcDPk~dsT~~l~gg~~~~tvld~l~~~~~~~~~l~~v~~~g~~gv~ 82 (273)
T PRK13232 3 QIAIYGKGGIGKSTTTQNLTAALSTMGNKILLVGCDPKADSTRMLLGGLNQKTVLDTLRSEGDEGVDLDVVMQPGFGDIK 82 (273)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHEEECCCCCEE
T ss_conf 79997998665887899999999977996999897884427778858998887999998618565636661542889738
Q ss_pred CCCCCCCC-CCHH-------H-HHHHHHHH--HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 21223586-6124-------5-42289999--651487599865433321157789999899876302223430112310
Q gi|254780709|r 169 FVCSEIGS-DAAA-------L-AYEAFKQA--QAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVL 237 (321)
Q Consensus 169 ~~~~~~~~-dp~~-------v-~~~a~~~a--~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVl 237 (321)
T Consensus 83 cv--e~ggp~~g~gcagrgii~~~~lle~l~~~~~~~Dyvl~Dvlgdvvcggfa~P-~----------~~~~A~evlIVt 149 (273)
T PRK13232 83 CV--ESGGPEPGVGCAGRGIITSIGLLENLGAYTDDLDYVFYDVLGDVVCGGFAMP-I----------REGKAKEIYIVA 149 (273)
T ss_pred EE--ECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCC-C----------CCCCCCEEEEEE
T ss_conf 98--6899876765453047888889997083214798899941473323653144-2----------016576899980
Q ss_pred CCCC----C-HHHHHHHHHHHH-HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCE
Q ss_conf 2335----2-257789998764-35897699965457870699999999976988
Q gi|254780709|r 238 DATT----G-QNALRQVEMFHA-VAGTTGLIMTKMDGTARGGGLIPIVVTHKIPV 286 (321)
Q Consensus 238 da~~----g-q~~~~~a~~F~~-~~~~~g~I~TKlD~ta~~G~~ls~~~~~~~Pi 286 (321)
T Consensus 150 s~E~~slyaannI~k~i~~~~~~~~rl~GiI~n~r~~~~~~e~v~~fa~~~g~~v 204 (273)
T PRK13232 150 SGELMAIYAANNICKGLAKFAKGGARLGGIICNSRNVDGERELLEAFAKKLGSQL 204 (273)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCE
T ss_conf 7608889999999999999962188501488505577638999999999719966