HHsearch alignment for GI: 254780709 and conserved domain: PRK13869
>PRK13869 plasmid-partitioning protein RepA; Provisional.
Probab=97.29 E-value=0.00022 Score=51.04 Aligned_cols=43 Identities=28% Similarity=0.355 Sum_probs=35.1
Q ss_pred CCCCEEECCCC-CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 67412311354-44442478999999985226742677434512
Q gi|254780709|r 109 HRPHVILVVGV-NGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFR 151 (321)
Q Consensus 109 ~~p~vil~vG~-nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR 151 (321)
T Consensus 119 ~~~kVIaVaN~KGGVGKTTtav~LA~~LA~~G~RVLlIDLDPQg 162 (405)
T PRK13869 119 EHLQVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQA 162 (405)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 99828999788877659999999999999779988999645617