HHsearch alignment for GI: 254780709 and conserved domain: PRK13869

>PRK13869 plasmid-partitioning protein RepA; Provisional.
Probab=97.29  E-value=0.00022  Score=51.04  Aligned_cols=43  Identities=28%  Similarity=0.355  Sum_probs=35.1

Q ss_pred             CCCCEEECCCC-CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             67412311354-44442478999999985226742677434512
Q gi|254780709|r  109 HRPHVILVVGV-NGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFR  151 (321)
Q Consensus       109 ~~p~vil~vG~-nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR  151 (321)
T Consensus       119 ~~~kVIaVaN~KGGVGKTTtav~LA~~LA~~G~RVLlIDLDPQg  162 (405)
T PRK13869        119 EHLQVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQA  162 (405)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf             99828999788877659999999999999779988999645617