HHsearch alignment for GI: 254780709 and conserved domain: TIGR00750

>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=98.14  E-value=1.9e-05  Score=58.61  Aligned_cols=143  Identities=25%  Similarity=0.350  Sum_probs=90.5

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC---CCHHHH--H--HHHHHH------HHHCCCCCCCCC
Q ss_conf             667412311354444424789999999852267426774345---124568--8--999997------530353212235
Q gi|254780709|r  108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDT---FRSAAI--D--QLKIWA------DRTSADFVCSEI  174 (321)
Q Consensus       108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~Dt---fR~aA~--e--QL~~~a------~~~~v~~~~~~~  174 (321)
T Consensus        35 ~GnA~~vG~TG~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg~FIRs~pt  114 (333)
T TIGR00750        35 TGNAHVVGITGVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPGVFIRSMPT  114 (333)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf             27907876646888857779999989997659768999887975975514545688775442222332289856767766


Q ss_pred             CCC---CHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf             866---12454228999965148759986543332115778999989987630222343011231023352257789998
Q gi|254780709|r  175 GSD---AAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVEM  251 (321)
Q Consensus       175 ~~d---p~~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~~  251 (321)
T Consensus       115 rG~lGGls~at~~~~~lldA~G~DVI~vETVGVGQSEV-------di~~~aD-------T~v~v~~-pg~G----Dd~Q~  175 (333)
T TIGR00750       115 RGSLGGLSKATRELVKLLDAAGYDVILVETVGVGQSEV-------DIINMAD-------TFVVVTI-PGTG----DDVQG  175 (333)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH-------HHHHHHC-------EEEEEEC-CCCC----CHHHH
T ss_conf             67525787999999999986389879998415752487-------8873415-------0589854-8878----34666


Q ss_pred             HHHHC-CC-CEEEEECCCCC
Q ss_conf             76435-89-76999654578
Q gi|254780709|r  252 FHAVA-GT-TGLIMTKMDGT  269 (321)
Q Consensus       252 F~~~~-~~-~g~I~TKlD~t  269 (321)
T Consensus       176 iKaG~mEiaDI~VVNKaD~~  195 (333)
T TIGR00750       176 IKAGVMEIADIYVVNKADGE  195 (333)
T ss_pred             HHHHHHEEEEEEEEECCCCC
T ss_conf             65443023248788168876