HHsearch alignment for GI: 254780709 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=98.14 E-value=1.9e-05 Score=58.61 Aligned_cols=143 Identities=25% Similarity=0.350 Sum_probs=90.5
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC---CCHHHH--H--HHHHHH------HHHCCCCCCCCC
Q ss_conf 667412311354444424789999999852267426774345---124568--8--999997------530353212235
Q gi|254780709|r 108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDT---FRSAAI--D--QLKIWA------DRTSADFVCSEI 174 (321)
Q Consensus 108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~Dt---fR~aA~--e--QL~~~a------~~~~v~~~~~~~ 174 (321)
T Consensus 35 ~GnA~~vG~TG~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg~FIRs~pt 114 (333)
T TIGR00750 35 TGNAHVVGITGVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPGVFIRSMPT 114 (333)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf 27907876646888857779999989997659768999887975975514545688775442222332289856767766
Q ss_pred CCC---CHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 866---12454228999965148759986543332115778999989987630222343011231023352257789998
Q gi|254780709|r 175 GSD---AAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVEM 251 (321)
Q Consensus 175 ~~d---p~~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~~ 251 (321)
T Consensus 115 rG~lGGls~at~~~~~lldA~G~DVI~vETVGVGQSEV-------di~~~aD-------T~v~v~~-pg~G----Dd~Q~ 175 (333)
T TIGR00750 115 RGSLGGLSKATRELVKLLDAAGYDVILVETVGVGQSEV-------DIINMAD-------TFVVVTI-PGTG----DDVQG 175 (333)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH-------HHHHHHC-------EEEEEEC-CCCC----CHHHH
T ss_conf 67525787999999999986389879998415752487-------8873415-------0589854-8878----34666
Q ss_pred HHHHC-CC-CEEEEECCCCC
Q ss_conf 76435-89-76999654578
Q gi|254780709|r 252 FHAVA-GT-TGLIMTKMDGT 269 (321)
Q Consensus 252 F~~~~-~~-~g~I~TKlD~t 269 (321)
T Consensus 176 iKaG~mEiaDI~VVNKaD~~ 195 (333)
T TIGR00750 176 IKAGVMEIADIYVVNKADGE 195 (333)
T ss_pred HHHHHHEEEEEEEEECCCCC
T ss_conf 65443023248788168876