HHsearch alignment for GI: 254780709 and conserved domain: TIGR02903
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..
Probab=96.74 E-value=0.013 Score=38.55 Aligned_cols=82 Identities=28% Similarity=0.377 Sum_probs=40.3
Q ss_pred CCEEECCCCCCCCHHHHHHHHHHH-HHHCCCCE-----EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf 412311354444424789999999-85226742-----677434512456889999975303532122358661245422
Q gi|254780709|r 111 PHVILVVGVNGVGKTTVIGKLSKK-MSDAGLKV-----MLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYE 184 (321)
Q Consensus 111 p~vil~vG~nG~GKTTT~aKLA~~-~~~~g~kV-----~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~ 184 (321)
T Consensus 176 PQHiiLYGPPGVGKTT-aARl~LEe~K~~~~tPF~~DA~FvEVDG------tTLRWDPREvTNPLLGSVH--DPI---YQ 243 (616)
T TIGR02903 176 PQHIILYGPPGVGKTT-AARLALEEAKKLKNTPFAEDAPFVEVDG------TTLRWDPREVTNPLLGSVH--DPI---YQ 243 (616)
T ss_pred CCCEEEECCCCCCHHH-HHHHHHHHCCCCCCCCCCCCCCEEEECC------CCCCCCCCCCCCCCCCCCC--CCC---CC
T ss_conf 6607855733884789-9999876213687447611378575157------6266774101477677625--765---56
Q ss_pred HHHH--HH-------------HHCCCEEEEECCCCC
Q ss_conf 8999--96-------------514875998654333
Q gi|254780709|r 185 AFKQ--AQ-------------AKKVDVLIIDTAGRL 205 (321)
Q Consensus 185 a~~~--a~-------------~~~~DvvliDTAGR~ 205 (321)
T Consensus 244 Ga~RDLAE~GvPEPk~GLVT~AHG-GvLFIDEIGEL 278 (616)
T TIGR02903 244 GARRDLAETGVPEPKLGLVTDAHG-GVLFIDEIGEL 278 (616)
T ss_pred CCCHHHCCCCCCCCCCCCCCCCCC-CEEEEECHHHH
T ss_conf 764011047879898987100477-56765021122