HHsearch alignment for GI: 254780709 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=97.39 E-value=0.0039 Score=42.30 Aligned_cols=112 Identities=19% Similarity=0.285 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHC----CCC-EEEEECCCCCHH-HH
Q ss_conf 999999999878520100121000136674123113544444247899999998522----674-267743451245-68
Q gi|254780709|r 82 QRVLYDVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKKMSDA----GLK-VMLAAGDTFRSA-AI 155 (321)
Q Consensus 82 ~~i~~~l~~~L~~~L~~~~~~~~~~~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~----g~k-V~lva~DtfR~a-A~ 155 (321)
T Consensus 23 deqI~~l~~~L~~~l~P--------G-~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~~T~y 93 (383)
T TIGR02928 23 DEQIEELAKALRPILRP--------G-SRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQILDTSY 93 (383)
T ss_pred HHHHHHHHHHHHHHHCC--------C-CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
T ss_conf 78999999998875067--------4-89872588788898788999999999999862269971589997785468469
Q ss_pred HHHHHHHHHH-----CCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCEEE--EECCCCC
Q ss_conf 8999997530-----35321223586612454228999965-1487599--8654333
Q gi|254780709|r 156 DQLKIWADRT-----SADFVCSEIGSDAAALAYEAFKQAQA-KKVDVLI--IDTAGRL 205 (321)
Q Consensus 156 eQL~~~a~~~-----~v~~~~~~~~~dp~~v~~~a~~~a~~-~~~Dvvl--iDTAGR~ 205 (321)
T Consensus 94 ~~~~~L~~~ln~~~~~~~v---P~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~L 148 (383)
T TIGR02928 94 QVLVELANQLNRRGSGEEV---PTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKL 148 (383)
T ss_pred HHHHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHH
T ss_conf 9999999985157788889---887787899999999998320188799986231022