HHsearch alignment for GI: 254780709 and conserved domain: TIGR03015

>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=97.61  E-value=0.00063  Score=47.85  Aligned_cols=143  Identities=24%  Similarity=0.305  Sum_probs=84.1

Q ss_pred             CCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH-
Q ss_conf             7412311354444424789999999852267426774345124568899999753035321223586612454228999-
Q gi|254780709|r  110 RPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQ-  188 (321)
Q Consensus       110 ~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~-  188 (321)
T Consensus        42 ~~g~~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~-~-~l~~~~ll~~i~~~lg~~~~-~~---~~~~~-~~~l~~~  114 (269)
T TIGR03015        42 REGFILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVN-T-RVDAEDLLRMVAADFGLETE-GR---DKAAL-LRELEDF  114 (269)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC-C-CCCHHHHHHHHHHHCCCCCC-CC---CHHHH-HHHHHHH
T ss_conf             89659997299898899999999845934548999769-9-99999999999998598988-98---99999-9999999


Q ss_pred             ---HH-HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHH------HHHHHHHHCCC
Q ss_conf             ---96-514875998654333211577899998998763022234301123102335225778------99987643589
Q gi|254780709|r  189 ---AQ-AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALR------QVEMFHAVAGT  258 (321)
Q Consensus       189 ---a~-~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~------~a~~F~~~~~~  258 (321)
T Consensus       115 L~~~~~~g~~~vliIDEAq~L~--~~~Le~Lr~L~n~e~--~~~~ll~ii-----L~GqpeL~~~L~~~~~~~l~qRI~~  185 (269)
T TIGR03015       115 LIEQFAAGKRALLVVDEAQNLT--PELLEELRMLSNFQT--DNAKLLQIF-----LVGQPEFRETLQSPQLQQLRQRIIA  185 (269)
T ss_pred             HHHHHHCCCCEEEEEECHHHCC--HHHHHHHHHHHCCCC--CCCCCEEEE-----EECCHHHHHHHCCCCHHHHHHCEEE
T ss_conf             9999966994699972422199--999999999970135--888704899-----9578679998727402545550767


Q ss_pred             CEEEEECCCCC
Q ss_conf             76999654578
Q gi|254780709|r  259 TGLIMTKMDGT  269 (321)
Q Consensus       259 ~g~I~TKlD~t  269 (321)
T Consensus       186 -~~~L~pl~~e  195 (269)
T TIGR03015       186 -SCHLGPLDRE  195 (269)
T ss_pred             -EEEECCCCHH
T ss_conf             -9984799989