HHsearch alignment for GI: 254780709 and conserved domain: TIGR03453
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=97.26 E-value=0.00025 Score=50.74 Aligned_cols=43 Identities=28% Similarity=0.353 Sum_probs=35.5
Q ss_pred CCCCCEEECCCC-CCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 667412311354-4444247899999998522674267743451
Q gi|254780709|r 108 SHRPHVILVVGV-NGVGKTTVIGKLSKKMSDAGLKVMLAAGDTF 150 (321)
Q Consensus 108 ~~~p~vil~vG~-nG~GKTTT~aKLA~~~~~~g~kV~lva~Dtf 150 (321)
T Consensus 101 g~~~~VIav~N~KGGVGKTTtav~LA~~LA~~G~RVLvIDLDPQ 144 (387)
T TIGR03453 101 GEHLQVIAVTNFKGGSGKTTTSAHLAQYLALRGYRVLAIDLDPQ 144 (387)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf 99880899978887656999999999999977998899953701