HHsearch alignment for GI: 254780709 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=97.27 E-value=0.0097 Score=39.53 Aligned_cols=175 Identities=22% Similarity=0.285 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99999987852010012100013667412311354444424789999999852267426774345124568899999753
Q gi|254780709|r 85 LYDVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADR 164 (321)
Q Consensus 85 ~~~l~~~L~~~L~~~~~~~~~~~~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~ 164 (321)
T Consensus 148 i~~L~~~i~~~l~~~~~~--~~~~~~~iriaivGrPNvGKSTl~N~l----l~~~r~--i----------------vs~~ 203 (429)
T TIGR03594 148 IGDLLDAILELLPEEEEE--EEEEDGPIKIAIIGRPNVGKSTLVNAL----LGEERV--I----------------VSDI 203 (429)
T ss_pred HHHHHHHHHHHCCCCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHH----HHHHHH--H----------------CCCC
T ss_conf 999999999658866555--434556526999748876546777776----543332--1----------------4799
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC---CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf 0353212235866124542289999651487599865433---3211577899998998763022234301123102335
Q gi|254780709|r 165 TSADFVCSEIGSDAAALAYEAFKQAQAKKVDVLIIDTAGR---LHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATT 241 (321)
Q Consensus 165 ~~v~~~~~~~~~dp~~v~~~a~~~a~~~~~DvvliDTAGR---~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~ 241 (321)
T Consensus 204 ~Gt-------TrD~i~~~~------~~~~~~~~~iDTaGirkk~k~~-~~~e~~-s~~~t~~~i~--~~dvvil~iD~~~ 266 (429)
T TIGR03594 204 AGT-------TRDSIDIPF------ERNGKKYLLIDTAGIRRKGKVT-EGIEKY-SVLRTLKAIE--RADVVLLVLDATE 266 (429)
T ss_pred CCC-------CCCCEEEEE------EECCEEEEEEECCCCCCCCCCC-HHHHHH-HHHHHHHHHH--HCCEEEEEEECCC
T ss_conf 986-------310268799------9999089999898876366423-047799-9999999987--4477999997665
Q ss_pred CHHHH--HHHHHHHHHCCCCEEEEECCCCCCCHHHHHH--------HHHHHCCCEEEEEC--CCCCCCCCC
Q ss_conf 22577--8999876435897699965457870699999--------99997698899975--898132555
Q gi|254780709|r 242 GQNAL--RQVEMFHAVAGTTGLIMTKMDGTARGGGLIP--------IVVTHKIPVYFLGV--GEGINDLEP 300 (321)
Q Consensus 242 gq~~~--~~a~~F~~~~~~~g~I~TKlD~ta~~G~~ls--------~~~~~~~Pi~fig~--Ge~i~Dl~~ 300 (321)
T Consensus 267 ~~~~qD~~i~~~i~~~~k~~ii~~NK~Dli~~~~~~~~~~~~i~~~l~~~~~~pI~fiSA~~g~gi~kl~~ 337 (429)
T TIGR03594 267 GITEQDLRIAGLALEAGKALIIVVNKWDLVKDEKTREEFKKELRRKLPFLDFAPIVFISALTGQGVDKLLD 337 (429)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
T ss_conf 88488899999898739976999972230379999999999999856236898689973457789999999