HHsearch alignment for GI: 254780709 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=96.95 E-value=0.016 Score=38.08 Aligned_cols=146 Identities=22% Similarity=0.297 Sum_probs=74.4
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 23113544444247899999998522674267743451245688999997530353212235866124542289999651
Q gi|254780709|r 113 VILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQAK 192 (321)
Q Consensus 113 vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~~ 192 (321)
T Consensus 1 ~VaIvGrpNVGKStLfN~L~------~~~~aIv~----------------~~~G~TR-------D~~~~------~~~~~ 45 (429)
T TIGR03594 1 VVAIVGRPNVGKSTLFNRLT------GKRDAIVA----------------DTPGVTR-------DRKYG------DAEWG 45 (429)
T ss_pred CEEEECCCCCCHHHHHHHHH------CCCEEECC----------------CCCCCCC-------CCEEE------EEEEC
T ss_conf 98999999987899999987------88617615----------------9899887-------73379------99999
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHH-HHHHHHHCCCCCCCCEEEEECCCCCCHHH--HHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 487599865433321157789999-89987630222343011231023352257--789998764358976999654578
Q gi|254780709|r 193 KVDVLIIDTAGRLHNNSILMAGIG-KMIRVLKRLDPHAPHSVLQVLDATTGQNA--LRQVEMFHAVAGTTGLIMTKMDGT 269 (321)
Q Consensus 193 ~~DvvliDTAGR~~~~~~lm~EL~-ki~~v~~~~~~~~p~~~~lVlda~~gq~~--~~~a~~F~~~~~~~g~I~TKlD~t 269 (321)
T Consensus 46 ~~~~~liDT~G~~~~~~~~~~~~~~q~~~ai~-----~aDlIlfVvD~~~git~~D~~i~~~Lrk~~k~vilviNK~D~~ 120 (429)
T TIGR03594 46 GREFILIDTGGIEEDDDGLDKQIREQAEIAIE-----EADVILFVVDGREGLTPEDEEIAKWLRKSGKPVILVANKIDGK 120 (429)
T ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-----HCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 90799998989898743789999999999998-----6799999985776898679999999987199789999834675
Q ss_pred CCHHHHHHHHHHHCCC-EEEEEC--CCCCCCCC
Q ss_conf 7069999999997698-899975--89813255
Q gi|254780709|r 270 ARGGGLIPIVVTHKIP-VYFLGV--GEGINDLE 299 (321)
Q Consensus 270 a~~G~~ls~~~~~~~P-i~fig~--Ge~i~Dl~ 299 (321)
T Consensus 121 -~~~~~~~ef~~LG~~~~i~iSA~h~~Gi~~L~ 152 (429)
T TIGR03594 121 -KEDAVAAEFYSLGFGEPIPISAEHGRGIGDLL 152 (429)
T ss_pred -CHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
T ss_conf -31456999998368986887420467999999