>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.21 E-value=0.021 Score=37.25 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=56.0 Q ss_pred CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 41231135444442478999999985226742677434512456889999975303532122358661245422899996 Q gi|254780709|r 111 PHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQ 190 (321) Q Consensus 111 p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~ 190 (321) T Consensus 25 Ge~~~i~G~nGaGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~----~~~~~~~~i~~--v~QLSgGqk---qrv~iA~al 95 (157) T cd00267 25 GEIVALVGPNGSGKSTLLRAIAGLLKPTSGEILIDGKDIAKL----PLEELRRRIGY--VPQLSGGQR---QRVALARAL 95 (157) T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCC----CHHHHHHCCCC--CCCCCHHHH---HHHHHHHHH T ss_conf 979999878899989999999588479962899999999979----99999940608--766886999---999999999 Q ss_pred HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH Q ss_conf 51487599865433321157789999899876 Q gi|254780709|r 191 AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVL 222 (321) Q Consensus 191 ~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~ 222 (321) T Consensus 96 ~~~p~ililDEPts-gLD~~~~~~l~~~i~~l 126 (157) T cd00267 96 LLNPDLLLLDEPTS-GLDPASRERLLELLREL 126 (157) T ss_pred HCCCCEEEEECCCC-CCCHHHHHHHHHHHHHH T ss_conf 70999999969876-68999999999999999

HHsearch alignment for GI: 254780709 and conserved domain: cd00267