HHsearch alignment for GI: 254780709 and conserved domain: cd01120

>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=97.83  E-value=0.00017  Score=51.78  Aligned_cols=95  Identities=24%  Similarity=0.231  Sum_probs=58.3

Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH---HCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             2311354444424789999999852267426774345124568899999753---0353212235866124542289999
Q gi|254780709|r  113 VILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADR---TSADFVCSEIGSDAAALAYEAFKQA  189 (321)
Q Consensus       113 vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~---~~v~~~~~~~~~dp~~v~~~a~~~a  189 (321)
T Consensus         1 ~~li~g~~g~GKttl~~~~~~~~~~~~~~~~~~~~ee~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (165)
T cd01120           1 LILVFGPTGSGKTTLALQLALNIATKGGKVVYVDIEEEIEELTERLIGESLKGALDNLIIVFATADDPAAARLLSKAERL   80 (165)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             98999899998999999999998763997999986664489999999862246713079993599976999999999999


Q ss_pred             H-HHCCCEEEEECCCCCCC
Q ss_conf             6-51487599865433321
Q gi|254780709|r  190 Q-AKKVDVLIIDTAGRLHN  207 (321)
Q Consensus       190 ~-~~~~DvvliDTAGR~~~  207 (321)
T Consensus        81 ~~~~~~vliiiDSit~~~~   99 (165)
T cd01120          81 RERGGDDLIILDELTRLVR   99 (165)
T ss_pred             HHCCCCEEEEEECHHHHHH
T ss_conf             9869977999928899887