HHsearch alignment for GI: 254780709 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=96.70 E-value=0.0052 Score=41.46 Aligned_cols=154 Identities=18% Similarity=0.239 Sum_probs=76.2
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3113544444247899999998522674267-743451245688999997530353212235866124542289999651
Q gi|254780709|r 114 ILVVGVNGVGKTTVIGKLSKKMSDAGLKVML-AAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQAK 192 (321)
Q Consensus 114 il~vG~nG~GKTTT~aKLA~~~~~~g~kV~l-va~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~~ 192 (321)
T Consensus 3 iaiiGHvd~GKTTL~~~ll~~tg~i~~~~~~~~~~D~~~---~E~-----e-RgiTi~-----~~~~~~~~---~~~~~~ 65 (179)
T cd01890 3 FSIIAHIDHGKSTLADRLLELTGTVSKREMKEQVLDSMD---LER-----E-RGITIK-----AQTVRLNY---KAKDGQ 65 (179)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCH---HHH-----H-CCCEEE-----EEEEEEEE---ECCCCC
T ss_conf 999948998989999999998599541457324416517---678-----6-386687-----43368884---136787
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH-----HHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 4875998654333211577899998998763022234301123102335225-----77899987643589769996545
Q gi|254780709|r 193 KVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN-----ALRQVEMFHAVAGTTGLIMTKMD 267 (321)
Q Consensus 193 ~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~-----~~~~a~~F~~~~~~~g~I~TKlD 267 (321)
T Consensus 66 ~~~in~iDtPGh--~d--F~~~~~~---al~-----~~D~allVVda~~Gv~~qT~~~~~~a~~~~--~p~-ivviNKiD 130 (179)
T cd01890 66 EYLLNLIDTPGH--VD--FSYEVSR---SLA-----ACEGALLLVDATQGVEAQTLANFYLALENN--LEI-IPVINKID 130 (179)
T ss_pred CEEEEEEECCCC--CC--CHHHHHH---HHH-----HHCEEEEEEECCCCCCHHHHHHHHHHHHCC--CCE-EEEEECCC
T ss_conf 148999989986--45--1778988---997-----544278998647787374899999998769--988-99986555
Q ss_pred C-CCCHHHHHHHH-HHHCC---CEEEEEC--CCCCCCCC
Q ss_conf 7-87069999999-99769---8899975--89813255
Q gi|254780709|r 268 G-TARGGGLIPIV-VTHKI---PVYFLGV--GEGINDLE 299 (321)
Q Consensus 268 ~-ta~~G~~ls~~-~~~~~---Pi~fig~--Ge~i~Dl~ 299 (321)
T Consensus 131 ~~~ad~~~v~~~i~~~~g~~~~~~v~vSA~~g~gv~~Ll 169 (179)
T cd01890 131 LPSADPERVKQQIEDVLGLDPSEAILVSAKTGLGVEDLL 169 (179)
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHH
T ss_conf 677899999999999868897674884378897989999