>cd01891 TypA_BipA TypA (tyrosine phosphorylated protein A)/BipA subfamily. BipA is a protein belonging to the ribosome-binding family of GTPases and is widely distributed in bacteria and plants. BipA was originally described as a protein that is induced in Salmonella typhimurium after exposure to bactericidal/permeability-inducing protein (a cationic antimicrobial protein produced by neutrophils), and has since been identified in E. coli as well. The properties thus far described for BipA are related to its role in the process of pathogenesis by enteropathogenic E. coli. It appears to be involved in the regulation of several processes important for infection, including rearrangements of the cytoskeleton of the host, bacterial resistance to host defense peptides, flagellum-mediated cell motility, and expression of K5 capsular genes. It has been proposed that BipA may utilize a novel mechanism to regulate the expression of target genes. In addition, BipA from enteropathogenic E. co

Probab=97.30 E-value=0.017 Score=37.79 Aligned_cols=152 Identities=20% Similarity=0.275 Sum_probs=82.4 Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 23113544444247899999998522--6742677434512456889999975303532122358661245422899996 Q gi|254780709|r 113 VILVVGVNGVGKTTVIGKLSKKMSDA--GLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQ 190 (321) Q Consensus 113 vil~vG~nG~GKTTT~aKLA~~~~~~--g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~ 190 (321) T Consensus 4 Nv~iiGHvd~GKTTL~~~Ll~~tg~~~~~~~~~~~~~D~~---~~E~er------giTI~~~-----~~~~--------~ 61 (194) T cd01891 4 NIAIIAHVDHGKTTLVDALLKQSGTFRENEEVEERVMDSN---DLERER------GITILAK-----NTAV--------T 61 (194) T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCC---HHHHHC------CCCEEEE-----EEEE--------E T ss_conf 8999906898799999999997487630465216861475---888872------8763345-----8999--------9 Q ss_pred HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCH-----HHHHHHHHHHHHCCCCEEEEEC Q ss_conf 51487599865433321157789999899876302223430112310233522-----5778999876435897699965 Q gi|254780709|r 191 AKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQ-----NALRQVEMFHAVAGTTGLIMTK 265 (321) Q Consensus 191 ~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq-----~~~~~a~~F~~~~~~~g~I~TK 265 (321) T Consensus 62 ~~~~~~n~IDtPGH----~dF~~~~~~~~~~--------~D~ailVVdA~~Gv~~QT~~~l~~a~~~~--~~~-iv~iNK 126 (194) T cd01891 62 YKDTKINIVDTPGH----ADFGGEVERVLSM--------VDGVLLLVDASEGPMPQTRFVLKKALELG--LKP-IVVINK 126 (194) T ss_pred ECCEEEEEEECCCC----HHHHHHHHHHHHH--------CCEEEEEEECCCCCCHHHHHHHHHHHHCC--CCE-EEEEEC T ss_conf 89988999989984----7777789877643--------44678986537897589999999998729--974-998856 Q ss_pred CCC-CCCHHHHHHHHHH-----------HCCCEEEEE--CCCCCCCCCCC Q ss_conf 457-8706999999999-----------769889997--58981325557 Q gi|254780709|r 266 MDG-TARGGGLIPIVVT-----------HKIPVYFLG--VGEGINDLEPF 301 (321) Q Consensus 266 lD~-ta~~G~~ls~~~~-----------~~~Pi~fig--~Ge~i~Dl~~f 301 (321) T Consensus 127 ~D~~~a~~~~v~~ei~~~~~~~~~~~~~~~~pii~~SA~~G~~~d~~~~~ 176 (194) T cd01891 127 IDRPDARPEEVVDEVFDLFIELGATEEQLDFPVLYASAKNGWASLNLEDP 176 (194) T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC T ss_conf 45898889999999999998639993335885787256553357788656

HHsearch alignment for GI: 254780709 and conserved domain: cd01891