HHsearch alignment for GI: 254780709 and conserved domain: cd01894
>cd01894 EngA1 EngA1 subfamily. This CD represents the first GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=97.41 E-value=0.0037 Score=42.45 Aligned_cols=145 Identities=19% Similarity=0.246 Sum_probs=75.6
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 11354444424789999999852267426774345124568899999753035321223586612454228999965148
Q gi|254780709|r 115 LVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQAKKV 194 (321)
Q Consensus 115 l~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~~~~ 194 (321)
T Consensus 1 aivG~pN~GKSsL~N~l~------~~~~~ivs~~----------------~gtT-------r~~~~~~------~~~~~~ 45 (157)
T cd01894 1 AIVGRPNVGKSTLFNRLT------GRRDAIVEDT----------------PGVT-------RDRIYGE------AEWGGR 45 (157)
T ss_pred CCCCCCCCCHHHHHHHHH------CCCCEEEECC----------------CCCE-------EEEEEEE------EEECCE
T ss_conf 904899988999999995------8875354079----------------9935-------6678999------999998
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHH--HHHHHHHHCCCCEEEEECCCCCCCH
Q ss_conf 75998654333211577899998998763022234301123102335225778--9998764358976999654578706
Q gi|254780709|r 195 DVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALR--QVEMFHAVAGTTGLIMTKMDGTARG 272 (321)
Q Consensus 195 DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~--~a~~F~~~~~~~g~I~TKlD~ta~~ 272 (321)
T Consensus 46 ~~~lvDTpG~~~~~~~~~~~~~~--~~~~~i~--~ad~il~viDa~~~~~~~d~~i~~~l~~~~kp~i~v~NK~D~~~~~ 121 (157)
T cd01894 46 EFILIDTGGIEPDDEGISKEIRE--QAELAIE--EADVILFVVDGREGLTPADEEIAKYLRKSKKPVILVVNKVDNIKEE 121 (157)
T ss_pred EEEEEECCCCCCCCCHHHHHHHH--HHHHHHH--HCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCH
T ss_conf 89998578755566067899999--9999998--6590799998999999899999999998479809999787165864
Q ss_pred HHHHHHHHHHC-CCEEEEEC--CCCCCCCC
Q ss_conf 99999999976-98899975--89813255
Q gi|254780709|r 273 GGLIPIVVTHK-IPVYFLGV--GEGINDLE 299 (321)
Q Consensus 273 G~~ls~~~~~~-~Pi~fig~--Ge~i~Dl~ 299 (321)
T Consensus 122 ~~~~~~-~~l~~~~~i~iSA~~g~Gid~L~ 150 (157)
T cd01894 122 DEAAEF-YSLGFGEPIPISAEHGRGIGDLL 150 (157)
T ss_pred HHHHHH-HHCCCCCEEEEEEECCCCHHHHH
T ss_conf 569999-96599975999965894999999