>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.

Probab=96.53 E-value=0.079 Score=33.13 Aligned_cols=147 Identities=18% Similarity=0.212 Sum_probs=76.1 Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 23113544444247899999998522674267743451245688999997530353212235866124542289999651 Q gi|254780709|r 113 VILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQAK 192 (321) Q Consensus 113 vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~~ 192 (321) T Consensus 2 ~VaivG~pNvGKStL~N~L~------g~~~~v-~-~--~p~TT--------------------r~~~~------~~~~~~ 45 (168) T cd01897 2 TLVIAGYPNVGKSSLVNKLT------RAKPEV-A-P--YPFTT--------------------KSLFV------GHFDYK 45 (168) T ss_pred EEEEECCCCCCHHHHHHHHH------CCCCEE-C-C--CCCCC--------------------CCCEE------EEEEEC T ss_conf 79998899988999999995------898602-3-7--58723--------------------57436------899983 Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHH-HHHHCCCCCCCCEEEEECCCCCCH--HHHHHHHHHHHHCC-----CCEEEEE Q ss_conf 487599865433321157789999899-876302223430112310233522--57789998764358-----9769996 Q gi|254780709|r 193 KVDVLIIDTAGRLHNNSILMAGIGKMI-RVLKRLDPHAPHSVLQVLDATTGQ--NALRQVEMFHAVAG-----TTGLIMT 264 (321) Q Consensus 193 ~~DvvliDTAGR~~~~~~lm~EL~ki~-~v~~~~~~~~p~~~~lVlda~~gq--~~~~~a~~F~~~~~-----~~g~I~T 264 (321) T Consensus 46 ~~~~~liDTpGi~~~~~~~~~~ie~~~~~~l~----~~~d~il~viD~~~~~~~~~~~~~~l~~~i~~~~~~~p~i~v~N 121 (168) T cd01897 46 YLRWQVIDTPGLLDRPLEERNTIEMQAITALA----HLRAAVLFLFDPSETCGYSLEEQLSLFEEIKPLFKNKPVIVVLN 121 (168) T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH----HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 72768724886556747888899999999998----35776899996887678489999999998776525888799994 Q ss_pred CCCCCCCHH--HHHHHHHHHCCCEEEEEC--CCCCCCCC Q ss_conf 545787069--999999997698899975--89813255 Q gi|254780709|r 265 KMDGTARGG--GLIPIVVTHKIPVYFLGV--GEGINDLE 299 (321) Q Consensus 265 KlD~ta~~G--~~ls~~~~~~~Pi~fig~--Ge~i~Dl~ 299 (321) T Consensus 122 K~Dl~~~~~~~~~~~~~~~~~~~vi~ISA~~g~Gi~~L~ 160 (168) T cd01897 122 KIDLLTFEDLSEIEEEEELEGEEVLKISTLTEEGVDEVK 160 (168) T ss_pred CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHH T ss_conf 753458100799999997089988999815896999999

HHsearch alignment for GI: 254780709 and conserved domain: cd01897