>cd04165 GTPBP1_like GTPBP1-like. Mammalian GTP binding protein 1 (GTPBP1), GTPBP2, and nematode homologs AGP-1 and CGP-1 are GTPases whose specific functions remain unknown. In mouse, GTPBP1 is expressed in macrophages, in smooth muscle cells of various tissues and in some neurons of the cerebral cortex; GTPBP2 tissue distribution appears to overlap that of GTPBP1. In human leukemia and macrophage cell lines, expression of both GTPBP1 and GTPBP2 is enhanced by interferon-gamma (IFN-gamma). The chromosomal location of both genes has been identified in humans, with GTPBP1 located in chromosome 22q12-13.1 and GTPBP2 located in chromosome 6p21-12. Human glioblastoma multiforme (GBM), a highly-malignant astrocytic glioma and the most common cancer in the central nervous system, has been linked to chromosomal deletions and a translocation on chromosome 6. The GBM translocation results in a fusion of GTPBP2 and PTPRZ1, a protein involved in oligodendrocyte differentiation, recovery, and

Probab=97.43 E-value=0.0013 Score=45.59 Aligned_cols=134 Identities=22% Similarity=0.192 Sum_probs=66.3 Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH------HHCC--CCC--CCC----CCCCCH Q ss_conf 31135444442478999999985226742677434512456889999975------3035--321--223----586612 Q gi|254780709|r 114 ILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWAD------RTSA--DFV--CSE----IGSDAA 179 (321) Q Consensus 114 il~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~------~~~v--~~~--~~~----~~~dp~ 179 (321) T Consensus 2 v~v~GhVD~GKSTL~G~Lt~g-----------~lDdGrg~ar~~~~rh~hE~~~G~Tssi~~~~lgf~~~g~~~~~~~~~ 70 (224) T cd04165 2 VAVVGNVDAGKSTLLGVLTQG-----------ELDNGRGKARLNLFRHKHEVESGRTSSVSNEILGFDSDGEVVNYPDNH 70 (224) T ss_pred EEEEECCCCCHHHHHHHHHCC-----------CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCCC T ss_conf 899948588488999998567-----------742221067778776189997265441156554010145320213476 Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH-----HHHHHHHHHH Q ss_conf 45422899996514875998654333211577899998998763022234301123102335225-----7789998764 Q gi|254780709|r 180 ALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQN-----ALRQVEMFHA 254 (321) Q Consensus 180 ~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~-----~~~~a~~F~~ 254 (321) T Consensus 71 ~~-~~~~~~~~~~~k~it~iD~pGH~~y~kt~i~G~----------~~~~~d~~~LvV~A~~G~~~~T~ehl~l~~~l-- 137 (224) T cd04165 71 LS-ESDIEICEKSSKLVTFIDLAGHERYLKTTLFGL----------TGYAPDYAMLVVAANAGIIGMTKEHLGLALAL-- 137 (224) T ss_pred CC-CCCEEEECCCCCEEEEEECCCHHHHHHHHHHHH----------HCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH-- T ss_conf 54-422012136786799997887399999999876----------35568989999317889779999999999983-- Q ss_pred HCCCCEEEEECCCCCCCH Q ss_conf 358976999654578706 Q gi|254780709|r 255 VAGTTGLIMTKMDGTARG 272 (321) Q Consensus 255 ~~~~~g~I~TKlD~ta~~ 272 (321) T Consensus 138 ~ip~-~vvitKiDl~~~~ 154 (224) T cd04165 138 NIPV-FVVVTKIDLAPAN 154 (224) T ss_pred CCCE-EEEEECCCCCCHH T ss_conf 9998-9999897768989

HHsearch alignment for GI: 254780709 and conserved domain: cd04165