HHsearch alignment for GI: 254780709 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=96.80 E-value=0.0028 Score=43.36 Aligned_cols=139 Identities=22% Similarity=0.301 Sum_probs=68.4
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 66741231135444442478999999985226742677434512456889999975303532122358661245422899
Q gi|254780709|r 108 SHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFK 187 (321)
Q Consensus 108 ~~~p~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~ 187 (321)
T Consensus 11 ~~k~~Ki~llG~~~vGKTsll~~~~----~-~~~~~~~------p-----------Tig~~~~---------~v------ 53 (174)
T pfam00025 11 LNKEMRILILGLDNAGKTTILYKLK----L-GEIVTTI------P-----------TIGFNVE---------TV------ 53 (174)
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHH----C-CCCCCCC------C-----------CCCCEEE---------EE------
T ss_conf 8966699999999998899999995----4-9988744------7-----------4682389---------99------
Q ss_pred HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHH-HHHHHC------CCCE
Q ss_conf 996514875998654333211577899998998763022234301123102335225778999-876435------8976
Q gi|254780709|r 188 QAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVE-MFHAVA------GTTG 260 (321)
Q Consensus 188 ~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~-~F~~~~------~~~g 260 (321)
T Consensus 54 --~~~~~~~~iwDt~Gqe~~-----~~~~------~~y~~-~a~~ii~V~D~t~~~-s~~~~~~~l~~~l~~~~~~~~pi 118 (174)
T pfam00025 54 --TYKNVKFTVWDVGGQESL-----RPLW------RNYFP-NTDAVIFVVDSADRD-RIEEAKEELHALLNEEELADAPL 118 (174)
T ss_pred --EECCEEEEEEECCCCCCC-----CHHH------HHHHC-CCCEEEEEEECCCHH-HHHHHHHHHHHHHHHHCCCCCEE
T ss_conf --989999999827987023-----2679------98841-782689998678678-79999999999875423589708
Q ss_pred -EEEECCCCC-CCH----HHHHHHHHHHCCCEEEEE----CCCCCCCC
Q ss_conf -999654578-706----999999999769889997----58981325
Q gi|254780709|r 261 -LIMTKMDGT-ARG----GGLIPIVVTHKIPVYFLG----VGEGINDL 298 (321)
Q Consensus 261 -~I~TKlD~t-a~~----G~~ls~~~~~~~Pi~fig----~Ge~i~Dl 298 (321)
T Consensus 119 liv~NK~DL~~~~~~~ei~~~~~~~~~~~~~~~~~~~SAktG~gI~e~ 166 (174)
T pfam00025 119 LILANKQDLPGAMSEAEIRELLGLHELKSRPWEIQGCSAVTGEGLDEG 166 (174)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH
T ss_conf 998725667678999999999978644179968999988679598999