HHsearch alignment for GI: 254780709 and conserved domain: pfam00270
>pfam00270 DEAD DEAD/DEAH box helicase. Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Probab=96.14 E-value=0.057 Score=34.14 Aligned_cols=51 Identities=18% Similarity=0.077 Sum_probs=29.5
Q ss_pred EECCCCCCCCHHHHHHHHH-HHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 3113544444247899999-998522-674267743451245688999997530
Q gi|254780709|r 114 ILVVGVNGVGKTTVIGKLS-KKMSDA-GLKVMLAAGDTFRSAAIDQLKIWADRT 165 (321)
Q Consensus 114 il~vG~nG~GKTTT~aKLA-~~~~~~-g~kV~lva~DtfR~aA~eQL~~~a~~~ 165 (321)
T Consensus 17 ~iv~~pTGsGKT~~~~~~~l~~~~~~~~~~~~v~l~-Pt~aL~~q~~~~~~~~~ 69 (167)
T pfam00270 17 VLVQAPTGSGKTLAFLLPALQALLKNPDGPQALVLA-PTRELAEQIYEELKKLG 69 (167)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC-CHHHHHHHHHHHHHHHH
T ss_conf 899889997589999999999987477898799990-60888889998864321