HHsearch alignment for GI: 254780709 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=97.35 E-value=6.9e-05 Score=54.61 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=28.7
Q ss_pred CEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 1231135444442478999999985226742677
Q gi|254780709|r 112 HVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLA 145 (321)
Q Consensus 112 ~vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lv 145 (321)
T Consensus 140 ~~ilIsG~TGSGKTT~l~all~~i~~~~~riiti 173 (283)
T pfam00437 140 GNILVSGGTGSGKTTLLYALLNEINTDDERIVTI 173 (283)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 7599988999988999999998408777627873