HHsearch alignment for GI: 254780709 and conserved domain: pfam02421
>pfam02421 FeoB_N Ferrous iron transport protein B. Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=97.08 E-value=0.0032 Score=42.96 Aligned_cols=147 Identities=22% Similarity=0.262 Sum_probs=76.6
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 23113544444247899999998522674267743451245688999997530353212235866124542289999651
Q gi|254780709|r 113 VILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQAK 192 (321)
Q Consensus 113 vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~~ 192 (321)
T Consensus 1 tVaIvG~PNvGKSTLlN~L~g------~~~-~V-s---------------~~pGtTr-------d~~~~~------~~~~ 44 (188)
T pfam02421 1 TIALVGNPNVGKTTLFNALTG------ARQ-HV-G---------------NWPGVTV-------EKKEGT------FKYK 44 (188)
T ss_pred CEEEECCCCCCHHHHHHHHHC------CCC-EE-E---------------CCCCCCC-------CEEEEE------EEEC
T ss_conf 989988999899999999959------996-56-3---------------8999723-------335768------7525
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH-HCCCCEEEEECCCCCCC
Q ss_conf 48759986543332115778999989987630222343011231023352257789998764-35897699965457870
Q gi|254780709|r 193 KVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVEMFHA-VAGTTGLIMTKMDGTAR 271 (321)
Q Consensus 193 ~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq~~~~~a~~F~~-~~~~~g~I~TKlD~ta~ 271 (321)
T Consensus 45 ~~~~~lvDTpGi~~~~~~~~~e--~v~~~--~~~~~~aDlvl~vvDa~~~er~l~l~~~l~~~~~p-~IvVlNK~Dl~~~ 119 (188)
T pfam02421 45 GYEIEIVDLPGTYSLSPYSEEE--KVARD--YLLEEKPDVIINVVDATNLERNLYLTLQLLELGIP-VVVALNMMDEAEK 119 (188)
T ss_pred CEEEEEEECCCCCCCCCCCHHH--HHHHH--HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC-EEEEECCCHHCCC
T ss_conf 1679999688850146532789--99999--98623687369997676245448999999976998-8999617020100
Q ss_pred HHHH---HHHHHHHCCCEEEEEC--CCCCCCCCC
Q ss_conf 6999---9999997698899975--898132555
Q gi|254780709|r 272 GGGL---IPIVVTHKIPVYFLGV--GEGINDLEP 300 (321)
Q Consensus 272 ~G~~---ls~~~~~~~Pi~fig~--Ge~i~Dl~~ 300 (321)
T Consensus 120 ~~~~~~~~~l~~~lg~~vi~ISA~~g~Gi~eL~~ 153 (188)
T pfam02421 120 KGIKIDIKKLSELLGVPVVPTSARKGEGIDELKD 153 (188)
T ss_pred CCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHH
T ss_conf 3652039999987399689999316999999999