HHsearch alignment for GI: 254780709 and conserved domain: pfam02606

>pfam02606 LpxK Tetraacyldisaccharide-1-P 4'-kinase. This family consists of tetraacyldisaccharide-1-P 4'-kinase also known as Lipid-A 4'-kinase or Lipid A biosynthesis protein LpxK, EC:2.7.1.130. This enzyme catalyses the reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D -glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxytetradecanoyl)-D-glu cosam inyl beta-phosphate <= ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D- glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS). The family contains a P-loop motif at the N terminus.
Probab=97.18  E-value=0.0034  Score=42.74  Aligned_cols=78  Identities=24%  Similarity=0.296  Sum_probs=51.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC---------------CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
Q ss_conf             35444442478999999985226742677434---------------512456889999975303532122358661245
Q gi|254780709|r  117 VGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGD---------------TFRSAAIDQLKIWADRTSADFVCSEIGSDAAAL  181 (321)
Q Consensus       117 vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~D---------------tfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v  181 (321)
T Consensus        43 it~GGtGKTP~v~~l~~~l~~~g~~~~ilSRGYg~~~~~~~~v~~~~~~~~~GDEp~l-la~~~~~~v~V~~~R------  115 (318)
T pfam02606        43 ITVGGTGKTPLVIALAELLRARGLRPGVLSRGYGGKSKGPVLVDPGSSAAEVGDEPLL-LARRTPVPVVVGPDR------  115 (318)
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCHHHCCCHHHH-HHHHCCCCEEECCCH------
T ss_conf             8458878589999999999976994478326767657887897168894673969999-987569859980528------


Q ss_pred             HHHHHHHHH-HHCCCEEEEECC
Q ss_conf             422899996-514875998654
Q gi|254780709|r  182 AYEAFKQAQ-AKKVDVLIIDTA  202 (321)
Q Consensus       182 ~~~a~~~a~-~~~~DvvliDTA  202 (321)
T Consensus       116 -~~a~~~l~~~~~~dviIlDDG  136 (318)
T pfam02606       116 -AAAARALLEAHGADVIILDDG  136 (318)
T ss_pred             -HHHHHHHHHHCCCCEEEECCC
T ss_conf             -999999998489979991486