HHsearch alignment for GI: 254780709 and conserved domain: pfam09439

>pfam09439 SRPRB Signal recognition particle receptor beta subunit. The beta subunit of the signal recognition particle receptor (SRP) is a transmembrane GTPase which anchors the alpha subunit to the endoplasmic reticulum membrane.
Probab=96.74  E-value=0.0063  Score=40.87  Aligned_cols=98  Identities=20%  Similarity=0.281  Sum_probs=52.1

Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             23113544444247899999998522674267743451245688999997530353212235866124542289999651
Q gi|254780709|r  113 VILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQAK  192 (321)
Q Consensus       113 vil~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~~~~~~dp~~v~~~a~~~a~~~  192 (321)
T Consensus         5 tvLllGl~~sGKT~Lf~~L~~-----~~~~~-------------------------T~tS~~---~n-~~~---~~~~~~   47 (181)
T pfam09439         5 AVIIAGLCDSGKTSLFTLLTT-----GSVRK-------------------------TVTSQE---PS-AAY---KYMNNK   47 (181)
T ss_pred             EEEEECCCCCCHHHHHHHHHC-----CCCCC-------------------------EECCCC---CC-CEE---EEECCC
T ss_conf             699986899989999999975-----99487-------------------------588867---86-406---875168


Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCH-HHHHHHHHHHHHC
Q ss_conf             487599865433321157789999899876302223430112310233522-5778999876435
Q gi|254780709|r  193 KVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQ-NALRQVEMFHAVA  256 (321)
Q Consensus       193 ~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~gq-~~~~~a~~F~~~~  256 (321)
T Consensus        48 ~~~~~lvD~PGh~klR~~~~~~~~~~---------~~~~gIVfVVDS~~~~~~l~~~Ae~Ly~iL  103 (181)
T pfam09439        48 GNSLTLIDFPGHVKLRYKLLETLKDS---------SSLRGLVFVVDSTAFPKEVTDTAEFLYDIL  103 (181)
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHH---------CCCEEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf             96689998899689999999864300---------264499999978665667999999999998