RPSBLAST alignment for GI: 254780709 and conserved domain: smart00382
>gnl|CDD|128665 smart00382, AAA, ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment. Length = 148
Score = 59.7 bits (144), Expect = 1e-09
Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 8/146 (5%)
Query: 110 RPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADF 169
VIL+VG G GKTT+ L++++ G V+ G+ +DQL +
Sbjct: 1 PGEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLL------IIV 54
Query: 170 VCSEIGSDAAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHA 229
+ A A+ K DVLI+D L + + ++ L+ L
Sbjct: 55 GGKKASGSGELRLRLALALARKLKPDVLILDEITSLLDAEQEALLL--LLEELRLLLLLK 112
Query: 230 PHSVLQVLDATTGQNALRQVEMFHAV 255
L V+ T + L +
Sbjct: 113 SEKNLTVILTTNDEKDLGPALLRRRF 138