RPSBLAST alignment for GI: 254780709 and conserved domain: COG0541

>gnl|CDD|30887 COG0541, Ffh, Signal recognition particle GTPase [Intracellular trafficking and secretion]. Length = 451

 Score =  206 bits (526), Expect = 7e-54
 Identities = 102/304 (33%), Positives = 162/304 (53%), Gaps = 22/304 (7%)

Query: 21  FASTSLKLKEGITDIISSRRLD-DGVREELEDL---LIRSDIGVAVAQKIVEELLTKRYA 76
           F S S +L   +  +    R+    V+E L ++   L+ +D+ + V +  ++ +  +   
Sbjct: 2   FESLSDRLSNALKKLRGKGRITEKDVKEALREIRRALLEADVNLKVVKDFIKRIKERALG 61

Query: 77  KDVS--------VQRVLYDVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVI 128
           ++V           +++Y+  EL+ K+L   +   N      P VIL+VG+ G GKTT  
Sbjct: 62  EEVPKGLTPGQQFIKIVYE--ELV-KLLGGENSELNLA-KKPPTVILMVGLQGSGKTTTA 117

Query: 129 GKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQ 188
           GKL+K +   G KV+L A DT+R AAI+QLK  A++    F  S    D   +A  A ++
Sbjct: 118 GKLAKYLKKKGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEK 177

Query: 189 AQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQ 248
           A+ +  DV+I+DTAGRLH +  LM  + ++  V+       P   L V+DA  GQ+A+  
Sbjct: 178 AKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVIN------PDETLLVVDAMIGQDAVNT 231

Query: 249 VEMFHAVAGTTGLIMTKMDGTARGGGLIPIVVTHKIPVYFLGVGEGINDLEPFVAKDFSA 308
            + F+   G TG+I+TK+DG ARGG  +        P+ F+G GE I+DLEPF    F++
Sbjct: 232 AKAFNEALGITGVILTKLDGDARGGAALSARAITGKPIKFIGTGEKIDDLEPFHPDRFAS 291

Query: 309 VITG 312
            I G
Sbjct: 292 RILG 295