HHsearch alignment of GI: 254780710 and MMDB domain: 1u0k_A_
>1u0k_A (A:) Gene product PA4716; sctructural genomics, MCSG, protein structure initiative, structural genomics, PSI; 1.50A {Pseudomonas aeruginosa PAO1}
Probab=100.00 E-value=7e-35 Score=249.39 Aligned_cols=264 Identities=16% Similarity=0.097 Sum_probs=203.0
Q ss_pred EEEECCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 37851767738999477888788888998720356714355899825888886689999717876212332033223111
Q gi|254780710|r 8 FAKMEGIGNKILVIDMRGCHDNITSDAINALSTDDNTHFDQIMLIHDFQDASVDAFIRIINCDGSEVQSCGNGMRCVVRF 87 (296)
Q Consensus 8 F~Kmhg~GNDFiiiD~~~~~~~~~~~~i~~~~~~~giG~Dgli~i~~~~~~~~d~~m~~fN~DGS~A~mCGNG~Rc~a~y 87 (296)
|+|||+.||+|.|++.. ..++.++.+.++++.+. ...+||.++. ..++++.+||+||+|+.|||||+||+++|
T Consensus 13 F~~~~~~GNp~~Vv~~~---~~l~~~~~~~iA~~~~~--~~t~fi~~~~--~~~~~~~~~~~~~~e~~~CGh~t~~~a~~ 85 (288)
T 1u0k_A 13 FAERPLTGNGLAVFDDA---SALDDAAXQAWTRELRQ--FESIFLLPGD--DPRAFRARIFTLEEELPFAGHPLLGAAAL 85 (288)
T ss_dssp SCSSTTCSEEEEEESCC---TTCCHHHHHHHHHHHCC--SEEEEEEECS--CTTEEEEEEEESSCBCCSCCTHHHHHHHH
T ss_pred CCCCCCCCCCEEEEECC---CCCCHHHHHHHHHHHCC--CEEEEEECCC--CCCEEEEEEEECCCCHHCCCCCHHHHHHH
T ss_conf 65999988756999889---99699999999998699--8699996367--89879999961788611046642235653
Q ss_pred HHCC---CCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCEECCEEEEECCC
Q ss_conf 0013---5764037983588379998577427740368777777685656565434430110577774021309995587
Q gi|254780710|r 88 LTSR---MKRKSFTFETIRGILVAKENRDGSISVDMGEPILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGN 164 (296)
Q Consensus 88 l~~~---~~~~~~~i~T~~g~~~~~~~~~~~v~V~mG~p~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGN 164 (296)
|.++ .+...+.++|.+|++.++...++.+...+..|.......+.............. .............+..++
T Consensus 86 l~~~g~~~~~~~~~~~t~~G~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 164 (288)
T 1u0k_A 86 LHHLRGGDNEQHWTLHLASKSVALRSVRAGSGFYAEXDQGRAEFGATPDAGTCRWFAEAFS-LSANDLSGHPPRVVSTGL 164 (288)
T ss_dssp HHHHHCCSSCEEEEEECSSCEEEEEEEEETTEEEEEEEEEECEECCCCCHHHHHHHHHHTT-CCGGGBCSSCCEEEESSS
T ss_pred HHHHCCCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHC-CCHHHCCCCCCEEEECCC
T ss_conf 3111024677169999537640688850476125531478884354122332667643200-001112587809997799
Q ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCC-CCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 42797425576868887631000233237555514679972887289998046-78766563235899999999817889
Q gi|254780710|r 165 PHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWER-GVGLTAACGSAACASVVASGCLHKTN 243 (296)
Q Consensus 165 PH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~fv~v~~~~~I~iRt~ER-GvGeTlACGTGA~Asa~~~~~~~~~~ 243 (296)
+|+++..+ ..+..+.+.++.+..||.+.||.++...+++....++++| |++|+.|||||+||.++++...+..+
T Consensus 165 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~r~~~~~~g~~Ed~atGSa~~ala~~l~~~g~~~ 239 (288)
T 1u0k_A 165 PYLLLPVT-----AEALGRARQVNDLQEALDKLGAAFVYLLDVDGREGRTWDNLGLVEDVATGSAAGPVAAYLVEYGLAA 239 (288)
T ss_dssp CEEEEEBC-----HHHHHTCCCCSCCHHHHHHHTCSEEEEEETTTTEEECBCTTSCSBCSCCHHHHHHHHHHHHHTTSSC
T ss_pred CEEEEEEC-----HHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 77999814-----1665635675888864313767999983256556510378775566466403899999999707878
Q ss_pred C--CEEEEC-----CCCEEEEEEECCCEEEEEECEEEEEEEEEEECCC
Q ss_conf 8--079990-----7957999995898199994628999889984132
Q gi|254780710|r 244 R--AVSVKM-----LGGGLLIEWHDNNHVFMTGEAKKEWEGKLDIKTG 284 (296)
Q Consensus 244 ~--~v~V~~-----pGG~L~v~~~~~~~i~l~Gpa~~vf~G~~~i~~~ 284 (296)
. .+.+++ ++|.|.+++++++.|+++|+|..+++|++.|...
T Consensus 240 ~~~~~~~~qg~~~~~~g~i~v~~~~~~~v~i~G~a~~~~~g~~~i~~~ 287 (288)
T 1u0k_A 240 RGEPFVLHQGRFLERPSRLDVQVATDGSVRVGGHVQLLARAELLTSAG 287 (288)
T ss_dssp TTSCEEEEECGGGTCCEEEEEEECSSSEEEEEEEEEEEEEEEECSCC-
T ss_pred CCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEEEECC
T ss_conf 884899982550289869999993899399998999999999995379