HHsearch alignment of GI: 254780710 and MMDB domain: 1u0k_A_

>1u0k_A (A:) Gene product PA4716; sctructural genomics, MCSG, protein structure initiative, structural genomics, PSI; 1.50A {Pseudomonas aeruginosa PAO1}
Probab=96.64  E-value=0.037  Score=33.69  Aligned_cols=98  Identities=9%  Similarity=-0.049  Sum_probs=69.5

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             58742797425576868887631000233237555514679972887289998046787665632358999999998178
Q gi|254780710|r  162 MGNPHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHK  241 (296)
Q Consensus       162 iGNPH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~fv~v~~~~~I~iRt~ERGvGeTlACGTGA~Asa~~~~~~~~  241 (296)
                      .|||=.|+...+.+.......+.+.+....       .-|+...++.....+.|=.=.+|-.-||-|+.|++.+....+.
T Consensus        19 ~GNp~~Vv~~~~~l~~~~~~~iA~~~~~~~-------t~fi~~~~~~~~~~~~~~~~~~e~~~CGh~t~~~a~~l~~~g~   91 (288)
T 1u0k_A           19 TGNGLAVFDDASALDDAAXQAWTRELRQFE-------SIFLLPGDDPRAFRARIFTLEEELPFAGHPLLGAAALLHHLRG   91 (288)
T ss_dssp             CSEEEEEESCCTTCCHHHHHHHHHHHCCSE-------EEEEEECSCTTEEEEEEEESSCBCCSCCTHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHCCCE-------EEEEECCCCCCEEEEEEEECCCCHHCCCCCHHHHHHHHHHHCC
T ss_conf             887569998899969999999999869986-------9999636789879999961788611046642235653311102


Q ss_pred             CC--CCEEEECCCCEEEEEEECCCEEE
Q ss_conf             89--80799907957999995898199
Q gi|254780710|r  242 TN--RAVSVKMLGGGLLIEWHDNNHVF  266 (296)
Q Consensus       242 ~~--~~v~V~~pGG~L~v~~~~~~~i~  266 (296)
                      ..  ..+.+.+++|.+.++...++...
T Consensus        92 ~~~~~~~~~~t~~G~~~v~~~~d~~~~  118 (288)
T 1u0k_A           92 GDNEQHWTLHLASKSVALRSVRAGSGF  118 (288)
T ss_dssp             CSSCEEEEEECSSCEEEEEEEEETTEE
T ss_pred             CCCCCEEEEEECCCCEEEEEEECCCCE
T ss_conf             467716999953764068885047612