HHsearch results for GI: 254780710 and protein with PDBid: 2pw0_A
>2pw0_A PRPF methylaconitate isomerase; propionate catabolism, diaminopimelate epimerase like, aconitate binding, unknown function; HET: TRC; 1.57A {Shewanella oneidensis} PDB: 2pvz_A 2h9f_A
Probab=91.02 E-value=0.78 Score=23.96 Aligned_cols=265 Identities=17% Similarity=0.156 Sum_probs=132.5
Q ss_pred CEEEEECCCCCCEEEEECCCCCCCCC-------HHHHHHHCC-----C--CCCCC-----CEEEEEECCCCCCCCEEEEE
Q ss_conf 11378517677389994778887888-------889987203-----5--67143-----55899825888886689999
Q gi|254780710|r 6 VDFAKMEGIGNKILVIDMRGCHDNIT-------SDAINALST-----D--DNTHF-----DQIMLIHDFQDASVDAFIRI 66 (296)
Q Consensus 6 i~F~Kmhg~GNDFiiiD~~~~~~~~~-------~~~i~~~~~-----~--~giG~-----Dgli~i~~~~~~~~d~~m~~ 66 (296)
|+.+-|-|-=--=+++...+.+.+.+ +.+.+.... | .|+|. --+-+|.++..+.+|..+.|
T Consensus 12 ip~~~mRGGTSkG~~f~~~dLP~d~~~~~~~~d~ill~~mGSpDp~~RQiDGlGGg~s~tSKvaIV~~s~~~~~DVDY~F 91 (397)
T 2pw0_A 12 VAATYMRGGTSKGVFFRLQDLPEAAQVPGPARDALLLRVIGSPDPYAKQIDGMGGATSSTSKTVILSHSSKANHDVDYLF 91 (397)
T ss_dssp EEEEEEEETTEEEEEEEGGGSCGGGSSSSHHHHHHHHHHHTCSCTTSSCTTSSCCSSTTTSEEEEEEECCSTTCSEEEEE
T ss_pred EEEEEEECCCCCEEEECHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
T ss_conf 54899814565053761766992511241468899999718998554434556677656535999947987897614688
Q ss_pred EEC-----CCCCCCCCCCHHHHHHHHHHCC-C-CC------C--EEEE-EECCCC-EEEEE-CCCCEEEEC----C-CCC
Q ss_conf 717-----8762123320332231110013-5-76------4--0379-835883-79998-577427740----3-687
Q gi|254780710|r 67 INC-----DGSEVQSCGNGMRCVVRFLTSR-M-KR------K--SFTF-ETIRGI-LVAKE-NRDGSISVD----M-GEP 123 (296)
Q Consensus 67 fN~-----DGS~A~mCGNG~Rc~a~yl~~~-~-~~------~--~~~i-~T~~g~-~~~~~-~~~~~v~V~----m-G~p 123 (296)
--- -=+-+.+|||=+-.++-|+.++ . .. . ..+| .|..+. +.+.+ ..++.+..+ + |.|
T Consensus 92 ~QV~v~~~~VD~~~NCGNm~saVgpfAie~GLV~a~~~~~~~~t~VrI~ntNT~k~i~~~v~~~~G~~~~~Gd~~IdGVp 171 (397)
T 2pw0_A 92 GQVSIDKPFVDWSGNCGNLTAAVGAFAISNGLIDAARIPRNGVCTVRIWQANIGKTIIAHVPITDGAVQETGDFELDGVT 171 (397)
T ss_dssp EEECSSSSCEECSSCCTTTHHHHHHHHHHTTCSCGGGCCSSEEEEEEEEETTTTEEEEEEEEEETTEECCCCSBCCTTCS
T ss_pred EEEECCCCEEECCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEECCCCC
T ss_conf 88731674442355655233214245876688454325889869999997389866899962489741567985416878
Q ss_pred CCC------------------HHHCCCCCCCCCCCCCEEECCCCCCCEECCEEEEECCCCEEEEECCCCCC------HHH
Q ss_conf 777------------------77685656565434430110577774021309995587427974255768------688
Q gi|254780710|r 124 ILD------------------WKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLY------HYD 179 (296)
Q Consensus 124 ~~~------------------~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGNPH~Vi~v~d~i~------~~~ 179 (296)
-.. -+..|--...+. +.+ ........++|+.|||-+.+-.+ |+- ..+
T Consensus 172 Gt~a~I~l~F~d~aGs~~~~tG~LlPTGn~~D~-----i~~---~g~~~i~vT~VD~g~P~Vfv~A~-dlGl~G~E~p~e 242 (397)
T 2pw0_A 172 FPAAEVQIEFMNPAADDDGEGGCMFPTGNLVDV-----LEV---PGIGRFNATMINAGIPTIFINAE-DLGYTGTELQDD 242 (397)
T ss_dssp SCBCCEEEEEESCBC--------CCTTSCSSEE-----EEE---TTTEEEEEEEEEBSSEEEEEEGG-GGTCCSCCCHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEE-----EEC---CCCCCEEEEEEECCCCEEEEEHH-HCCCCCCCCHHH
T ss_conf 888860477006235788877773799997304-----863---79884789999568968999888-868776569888
Q ss_pred H------HHHHHCCCC-----------------CCCCCCCCCEEEEEE-------------CCCCEEEEEECCCCCCCCC
Q ss_conf 8------763100023-----------------323755551467997-------------2887289998046787665
Q gi|254780710|r 180 L------ASFGNLLAK-----------------HPMFSEGVNLSIARV-------------TSLESLDLRTWERGVGLTA 223 (296)
Q Consensus 180 l------~~~g~~i~~-----------------~~~Fp~gvNV~fv~v-------------~~~~~I~iRt~ERGvGeTl 223 (296)
| ...=..||. .+..|. +.++.- .+.-.|.+|.|=-|.=..-
T Consensus 243 L~a~~~ll~rlE~IR~~Aa~~MGL~~~~~~~~~~~~vPK---i~lVspP~~~~~~~g~~~~~~~~dI~~R~~s~~~~H~a 319 (397)
T 2pw0_A 243 INSDNAALAKFETIRAHGALRMGLIKHIDEAASRQHTPK---IAFVAPPKSYASSSGKTVAAEDVDLLVRALSMGKLHHA 319 (397)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTSCSSGGGGGGCCSSSE---EEEEESCCCEECTTSCEECGGGCSEEEEEEETTEECSS
T ss_pred HHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC---EEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHH
T ss_conf 741899999999999999986589777235522378880---79984787654568842026777558998228752144
Q ss_pred CCHHHHHHHHHHHHHHC---------CCCCCEEEECCCCEEEEEEE---CCCE-----EEEEECEEEEEEEEEEEC
Q ss_conf 63235899999999817---------88980799907957999995---8981-----999946289998899841
Q gi|254780710|r 224 ACGSAACASVVASGCLH---------KTNRAVSVKMLGGGLLIEWH---DNNH-----VFMTGEAKKEWEGKLDIK 282 (296)
Q Consensus 224 ACGTGA~Asa~~~~~~~---------~~~~~v~V~~pGG~L~v~~~---~~~~-----i~l~Gpa~~vf~G~~~i~ 282 (296)
-=.|||+|.+.++..-| .....++|..|.|.+.|... +++. ..+.-.|..+|+|++.+-
T Consensus 320 ~~vTgavcla~Aa~ipGTv~~~~~~~~~~~~v~I~HPsG~~~V~~~~~~~~~~~~v~~a~v~RTAR~Lm~G~V~VP 395 (397)
T 2pw0_A 320 MMGTAAVAIGTAAAIPGTLVNLAAGGGEKEAVRFGHPSGTLRVGAQAVQENGEWTVIKAIMSRSARVLMEGFVRVP 395 (397)
T ss_dssp CCHHHHHHHHHHHTSTTSHHHHHTTSSCCSEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEECEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEECHHHCEEEEECC
T ss_conf 4167899999988169837888505788875999689937999999863699824899999973231230679668