HHsearch results for GI: 254780710 and protein with PDBid: 3g7k_A
>3g7k_A 3-methylitaconate isomerase; DAPF family fold, closed conformation, open conformation; 2.70A {Eubacterium barkeri}
Probab=97.08 E-value=0.018 Score=34.82 Aligned_cols=273 Identities=17% Similarity=0.159 Sum_probs=143.9
Q ss_pred CCCCC-CEEEEECCCCCCEEEEECCCCCCCCCH---HHHHHHC---CC--CCCCC-----CEEEEEECCCCCCCCEEEEE
Q ss_conf 98754-113785176773899947788878888---8998720---35--67143-----55899825888886689999
Q gi|254780710|r 1 MQSSM-VDFAKMEGIGNKILVIDMRGCHDNITS---DAINALS---TD--DNTHF-----DQIMLIHDFQDASVDAFIRI 66 (296)
Q Consensus 1 ~~~~m-i~F~Kmhg~GNDFiiiD~~~~~~~~~~---~~i~~~~---~~--~giG~-----Dgli~i~~~~~~~~d~~m~~ 66 (296)
|+.-| |+.+-|-|-=--=+++...+.+.+... ...+.+. .| .|+|. --+-+|.++..+.+|..+.|
T Consensus 1 m~~q~~iP~~~mRGGTSKG~~f~~~dLP~d~~~~d~~ll~~mGSpD~rQiDGlGGg~s~tSKvaIV~~S~~~~~DVDY~F 80 (391)
T 3g7k_A 1 MSDQMRIPCVIMRAGTSKGIFLKGNDLPADQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTHPDADVDYTF 80 (391)
T ss_dssp -CCEEEEEEEEEEETTEEEEEEEGGGSCSSHHHHHHHHHHHHTCSCTTCTTSSSCSSGGGSEEEEEEECCSTTCSEEEEE
T ss_pred CCCCCCCCEEEEECCCCCEEEECHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE
T ss_conf 99774155899814565064671776998878999999997189980211677677666635999915877885047888
Q ss_pred EECCC-----CCCCCCCCHHHHHHHHHHCCC------CCCEEEE-EECCCC-EEEE-ECCCCEEEEC----C-CCCCCC-
Q ss_conf 71787-----621233203322311100135------7640379-835883-7999-8577427740----3-687777-
Q gi|254780710|r 67 INCDG-----SEVQSCGNGMRCVVRFLTSRM------KRKSFTF-ETIRGI-LVAK-ENRDGSISVD----M-GEPILD- 126 (296)
Q Consensus 67 fN~DG-----S~A~mCGNG~Rc~a~yl~~~~------~~~~~~i-~T~~g~-~~~~-~~~~~~v~V~----m-G~p~~~- 126 (296)
---.= +-+.+|||=+-.++-|+.++- .....+| .|..+. +.+. ...++.+..+ + |.|-..
T Consensus 81 ~QV~v~~~~VD~~~NCGN~~saVgpfAie~GLV~~~~~~t~VRI~n~NT~k~i~~~v~~~~G~~~~~Gd~~IdGVpGt~a 160 (391)
T 3g7k_A 81 AQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNA 160 (391)
T ss_dssp EEECSSSSCEECSSCCHHHHHHHHHHHHHTTSSCCCSSEEEEEEEETTTCCEEEEEEEEETTEECCCCSBCCTTSSSCBC
T ss_pred EEEECCCCEEECCCCCCCHHHHCCHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCC
T ss_conf 87523664441344544245403056886787236899458999971789879999975798202106623257788888
Q ss_pred --------------HHHCCCCCCCCCCCCCEEECCCCCCCEECCEEEEECCCCEEEEECCCCCC--H----HHH------
Q ss_conf --------------77685656565434430110577774021309995587427974255768--6----888------
Q gi|254780710|r 127 --------------WKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLY--H----YDL------ 180 (296)
Q Consensus 127 --------------~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGNPH~Vi~v~d~i~--~----~~l------ 180 (296)
-+..|--...+. +.+. . .....++|+.|||-.++-.+ |+- . .+|
T Consensus 161 ~I~l~F~d~aGs~TG~LlPTGn~~D~-----i~~~---g-~~i~vS~ID~g~P~Vfv~A~-dlG~~G~E~p~~l~a~~~l 230 (391)
T 3g7k_A 161 PELMDFSDTAGAATGKVLPTGNVVDV-----LSTS---K-GDIDVSIVDVANPCIFVHAK-DVNMTGTETPDVINGNADL 230 (391)
T ss_dssp CEEEECGGGBTTTTSSSSTTSCSCEE-----ECCT---T-CCEEEEEEEBSSEEEEEESG-GGTCCSCCCHHHHHTCHHH
T ss_pred CEECCCCCCCCCCCCCCCCCCCCCEE-----EECC---C-CEEEEEEEECCCCEEEEEHH-HCCCCCCCCHHHHHCCHHH
T ss_conf 23624668677778876789997607-----9548---9-82899999678848999877-8587775369878468999
Q ss_pred HHHHHCCC------------------CCCCCCCCCCEEEEEE--------------CCCCEEEEEECCCCC-CCCCCCHH
Q ss_conf 76310002------------------3323755551467997--------------288728999804678-76656323
Q gi|254780710|r 181 ASFGNLLA------------------KHPMFSEGVNLSIARV--------------TSLESLDLRTWERGV-GLTAACGS 227 (296)
Q Consensus 181 ~~~g~~i~------------------~~~~Fp~gvNV~fv~v--------------~~~~~I~iRt~ERGv-GeTlACGT 227 (296)
...=..|| +.+.+|. +.++.- .++-.|..|.|=-|. -.+++ .|
T Consensus 231 l~rlE~IR~~aa~~MGL~~~~~~a~~~~~~~PK---i~lVs~P~~~~~~s~g~~i~~~~~di~~R~~s~~~~H~a~~-vT 306 (391)
T 3g7k_A 231 LAYLEEIRAKCCVKIGMAATEKEASEKSPAFPM---IAFVTKPEDYVDFSTGNTISGDDVDLVSRLMFMQVLHKTYA-GT 306 (391)
T ss_dssp HHHHHHHHHHHHHHTTSCSSHHHHHHHCSSSSE---EEEEESCCCEECTTTCCEECTTSCSEEEEEECSSSBCSSCC-HH
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCE---EEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHH-HH
T ss_conf 999999999999864887784563213688887---99955875566655675123666458999804898623331-46
Q ss_pred HHHHHHHHHHHHC--------C--CCCCEEEECCCCEEEEEE-ECCCEEE---EEECEEEEEEEEEEECCCCCC
Q ss_conf 5899999999817--------8--898079990795799999-5898199---994628999889984132000
Q gi|254780710|r 228 AACASVVASGCLH--------K--TNRAVSVKMLGGGLLIEW-HDNNHVF---MTGEAKKEWEGKLDIKTGKWI 287 (296)
Q Consensus 228 GA~Asa~~~~~~~--------~--~~~~v~V~~pGG~L~v~~-~~~~~i~---l~Gpa~~vf~G~~~i~~~~~~ 287 (296)
||+|.|.++..-| . ....++|..|.|.+.|.. .+++.+. +.-.|..+|+|++.+....|.
T Consensus 307 gavclAaAa~ipGTV~~~l~~~~~~~~~v~I~HPsG~i~V~~~~~~~~v~~a~v~RTAR~Lm~G~Vyvp~~~~~ 380 (391)
T 3g7k_A 307 ATACTGSAARIPGTIVNQVLRDTGDEDTVRIGHPAGVIPVVSIVKDGKVEKAALIRTARRIMEGYVYVEKAKLV 380 (391)
T ss_dssp HHHHHHHHHHSTTSHHHHHCCCCTTCCEEEEEETTEEEEEEEEEETTEEEEEEEEECEEEEEEEEEEEEGGGCC
T ss_pred HHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEECHHHEEEEEECCHHHCC
T ss_conf 78888888707984066651367887659997899379999985899589999997401020378976566626