HHSEARCH alignment of GI: 254780710 and SCOP domain: d1qy9a1

Alignment
>d1qy9a1 d.21.1.2 (A:3-129) Hypothetical protein YddE {Escherichia coli [TaxId: 562]}
Probab=97.23  E-value=0.0039  Score=37.57  Aligned_cols=99  Identities=14%  Similarity=0.187  Sum_probs=73.5

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             58742797425576868887631000233237555514679972887289998046787665632358999999998178
Q gi|254780710|r  162 MGNPHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHK  241 (296)
Q Consensus       162 iGNPH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~fv~v~~~~~I~iRt~ERGvGeTlACGTGA~Asa~~~~~~~~  241 (296)
                      .|||-+|++..+.+..-.+..+++.+...+       .-|+.-.+...+++|.|=-. +|=.=||-++.|++.+....+.
T Consensus        15 ~GNpa~Vv~~~~~l~~~~mq~IA~e~n~sE-------TaFv~~~~~~~~~iR~FTP~-~Ev~~cGHaTLAaa~~L~~~~~   86 (127)
T d1qy9a1          15 RGNSAGVVFPADNLSEAQMQLIARELGHSE-------TAFLLHSDDSDVRIRYFTPT-VEVPICGHATVAAHYVRAKVLG   86 (127)
T ss_dssp             CSEEEEEEECCTTCCHHHHHHHHHHHCCSC-------EEEEECCSSSSEEEEEECSS-CEESCCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHCCCE-------EEEEECCCCCCEEEEEEECC-CCCCCCCCHHHHHHHHHHHHCC
T ss_conf             952589998887899999999999859962-------89984277885899998046-4412465578899999998448


Q ss_pred             CC-CCEEEECCCCEEEEEEEC-CC--EEEEE
Q ss_conf             89-807999079579999958-98--19999
Q gi|254780710|r  242 TN-RAVSVKMLGGGLLIEWHD-NN--HVFMT  268 (296)
Q Consensus       242 ~~-~~v~V~~pGG~L~v~~~~-~~--~i~l~  268 (296)
                      .+ ..+....+.|.|.|+... ++  .++|.
T Consensus        87 ~~~~~~~~~t~~G~l~v~v~~~~~~~~i~~~  117 (127)
T d1qy9a1          87 LGNCTIWQTSLAGKHRVTIEKHNDDYRISLE  117 (127)
T ss_dssp             CCSEEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred             CCCCEEEEEECCCEEEEEEEECCCEEEEEEE
T ss_conf             8997799994671699999973997999901


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Diaminopimelate epimerase-like
superfamily: Diaminopimelate epimerase-like
family: PhzC/PhzF-like
domain: Hypothetical protein YddE
species: Escherichia coli [TaxId: 562]