HHSEARCH alignment of GI: 254780710 and SCOP domain: d1qy9a2

Alignment
>d1qy9a2 d.21.1.2 (A:130-297) Hypothetical protein YddE {Escherichia coli [TaxId: 562]}
Probab=94.25  E-value=0.16  Score=26.84  Aligned_cols=78  Identities=13%  Similarity=0.053  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEECCCCC----CCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCC--CCCCCCCHHHHHH
Q ss_conf             1767738999477888----788888998720356714355899825888886689999717876--2123320332231
Q gi|254780710|r   12 EGIGNKILVIDMRGCH----DNITSDAINALSTDDNTHFDQIMLIHDFQDASVDAFIRIINCDGS--EVQSCGNGMRCVV   85 (296)
Q Consensus        12 hg~GNDFiiiD~~~~~----~~~~~~~i~~~~~~~giG~Dgli~i~~~~~~~~d~~m~~fN~DGS--~A~mCGNG~Rc~a   85 (296)
                      -..||.|+++...+.+    ..+..+.++.++++.++  .++.+..... ...++++|+|.+-..  |.--||.+.-|++
T Consensus        28 vs~G~~~~~v~v~~~~~l~~~~pd~~~~~~~~~~~~~--~~~~v~~~~~-~~~~~~~R~F~p~~Gi~EDpaTGsaa~ala  104 (168)
T d1qy9a2          28 ATTGHSKVMIPLKPEVDIDALSPDLNALTAISKKIGC--NGFFPFQIRP-GKNETDGRMFSPAIGIVEDPVTGNANGPMG  104 (168)
T ss_dssp             EESSSCEEEEEBCTTSCGGGCCCCHHHHHHHHHHHTC--CCEEEEEECT-TSSEEEECEEEGGGTEEEESCCHHHHHHHH
T ss_pred             EECCCCEEEEEECCHHHHHHCCCCHHHHHHHHHCCCC--CEEEEEEECC-CCCEEEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf             9569986999978989963259998999965400584--4899999669-888699996157675455323104578899


Q ss_pred             HHHHCCC
Q ss_conf             1100135
Q gi|254780710|r   86 RFLTSRM   92 (296)
Q Consensus        86 ~yl~~~~   92 (296)
                      .||.++.
T Consensus       105 ~yL~~~~  111 (168)
T d1qy9a2         105 AWLVHHN  111 (168)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHCC
T ss_conf             9999717


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Diaminopimelate epimerase-like
superfamily: Diaminopimelate epimerase-like
family: PhzC/PhzF-like
domain: Hypothetical protein YddE
species: Escherichia coli [TaxId: 562]