HHSEARCH alignment of GI: 254780710 and SCOP domain: d2gkea2

Alignment
>d2gkea2 d.21.1.1 (A:131-274) Diaminopimelate epimerase {Haemophilus influenzae [TaxId: 727]}
Probab=100.00  E-value=3.2e-43  Score=301.81  Aligned_cols=125  Identities=38%  Similarity=0.656  Sum_probs=118.8

Q ss_pred             CEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf             30999558742797425576868887631000233237555514679972887289998046787665632358999999
Q gi|254780710|r  156 NPFVVSMGNPHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVA  235 (296)
Q Consensus       156 ~~~~v~iGNPH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~fv~v~~~~~I~iRt~ERGvGeTlACGTGA~Asa~~  235 (296)
                      .+++|+|||||+|+|++ +++.+++..+|+.||+|+.||+|+||+|++++++++|++||||||||||+||||||||+|++
T Consensus        19 ~~~~V~vGNPH~Vi~v~-~l~~~~~~~~g~~i~~~~~fp~g~Nv~f~~~~~~~~i~iRt~ERGvGeTlaCGTGA~Aaa~~   97 (144)
T d2gkea2          19 LCGAVSMGNPHCVVQVD-DIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAV   97 (144)
T ss_dssp             EEEEEESSSEEEEEECS-CTTTSCHHHHHHHHHTCTTCTTCCEEEEEEEEETTEEEEEEEETTTEECSCCHHHHHHHHHH
T ss_pred             EEEEEECCCCEEEEEEC-CCCCCCHHHHCCEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf             99999879985999977-70207656726430046321333551279994288089999368871144433006899999


Q ss_pred             HHHHCCCCCCEEEECCCCEEEEEEEC-CCEEEEEECEEEEEEEEEEE
Q ss_conf             99817889807999079579999958-98199994628999889984
Q gi|254780710|r  236 SGCLHKTNRAVSVKMLGGGLLIEWHD-NNHVFMTGEAKKEWEGKLDI  281 (296)
Q Consensus       236 ~~~~~~~~~~v~V~~pGG~L~v~~~~-~~~i~l~Gpa~~vf~G~~~i  281 (296)
                      +.++++.+++++|.+|||.|.|+|++ +++|+|+|||++||+|+++|
T Consensus        98 ~~~~~~~~~~i~V~~~GG~l~V~~~~~~~~i~L~Gpa~~vf~G~i~l  144 (144)
T d2gkea2          98 GIMQGLLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL  144 (144)
T ss_dssp             HHHTTSSCSEEEEEETTEEEEEEECCTTSCEEEEECCEEEEEEECCC
T ss_pred             HHHCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCEEEEEEEEEC
T ss_conf             99809999739999789879999988999899991679999999989


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Diaminopimelate epimerase-like
superfamily: Diaminopimelate epimerase-like
family: Diaminopimelate epimerase
domain: Diaminopimelate epimerase
species: Haemophilus influenzae [TaxId: 727]