RPSBLAST alignment for GI: 254780710 and conserved domain: TIGR00652

>gnl|CDD|129737 TIGR00652, DapF, diaminopimelate epimerase. Length = 268
 Score =  193 bits (493), Expect = 4e-50
 Identities = 93/278 (33%), Positives = 143/278 (51%), Gaps = 20/278 (7%)

Query: 8   FAKMEGIGNKILVIDMRGCHDNITSDAINALSTDDNTHF----DQIMLIHDFQDASVDAF 63
           F+KM G+GN  +++D          + +  +    + HF    D ++ +      + D  
Sbjct: 3   FSKMHGLGNDFVLVDDFDAELVFEPEFVRQVC---DRHFGIGADGVLFVEPGSPEA-DYK 58

Query: 64  IRIINCDGSEVQSCGNGMRCVVRFLTSR--MKRKSFTFETIRGILVAKENRDGSISVDMG 121
           +RI N DGSE + CGNG+RC  +F+     + +K  + ET+ G++V +   +  + VDMG
Sbjct: 59  MRIFNSDGSEAEMCGNGIRCFAKFVYEHGLVNKKDISVETLAGLIVLEVKSENKVKVDMG 118

Query: 122 EPILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLYHYDLA 181
           EP      IPL     +                     V  GNPH + FV DD+   +L 
Sbjct: 119 EPNFKPAEIPLTVWKFEEP---------EVGLFGEILAVDTGNPHLVVFV-DDVEGLNLL 168

Query: 182 SFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHK 241
             G LL  H  F EGVN++  +V + +++ LRT+ERG G T ACG+ ACAS  A+  L  
Sbjct: 169 ILGPLLEYHERFPEGVNVNFVQVKNDDTIKLRTYERGAGETLACGTGACASAAAALKLGG 228

Query: 242 TNRAVSVKMLGGGLLIEWHDNNHVFMTGEAKKEWEGKL 279
           T + V+V + GG L IEW ++ HV+MTG A   ++G+L
Sbjct: 229 TPKKVTVHLPGGELEIEWKEDGHVYMTGPAVLVFDGEL 266