RPSBLAST alignment of GI: 254780710 and protein with PDBid: 1qya
>1qya_A ORFB, hypothetical protein YDDE; putative phenazine biosynthesis protein, epimerase, antibiotic biosynthesis protein, structural genomics; 2.00A {Escherichia coli} SCOP: d.21.1.2 d.21.1.2 PDB: 1sdj_A 1qy9_A Length = 307
Score = 66.9 bits (162), Expect = 5e-12
Identities = 28/240 (11%), Positives = 63/240 (26%), Gaps = 20/240 (8%)
Query: 61 DAFIRIINCDGSEVQSCGNGMRCVVRFLTSRMK--RKSFTFETIRGILVAKENRDGSISV 118
D IR EV CG+ + + ++ G +
Sbjct: 67 DVRIRYFT-PTVEVPICGHATVAAHYVRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYR 125
Query: 119 DMGEPILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLYHY 178
E PL + H+ + L V + G+ + ++ ++
Sbjct: 126 ISLEQGTPGFEPPLEGETRAAIINALHLTEDDILPGLPIQVATTGHSKVMIPLKPEVDID 185
Query: 179 DLASFGNLLAKHPMFSEGVNLSIARVTSLES-LDLRTWERGVGLTAACGSAACASVVASG 237
L+ N L ++ ++ D R + +G+ + + +
Sbjct: 186 ALSPDLNALTAISKKIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAW 245
Query: 238 CLHKTNRAVSVKML------------GGGLLIEWH----DNNHVFMTGEAKKEWEGKLDI 281
+H +L G + + V ++G A + + I
Sbjct: 246 LVHHNVLPHDGNVLRVKGHQGRALGRDGMIEVTVTIRDNQPEKVTISGTAVILFHAEWAI 305