HHsearch alignment for GI: 254780711 and conserved domain: CHL00072

>CHL00072 chlL photochlorophyllide reductase subunit L.
Probab=95.82  E-value=0.014  Score=39.84  Aligned_cols=158  Identities=19%  Similarity=0.234  Sum_probs=84.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-----------CHHHHHHHHHH---H-----------CCC
Q ss_conf             8996234433346889999999986148950782054221-----------00477999985---1-----------034
Q gi|254780711|r  102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHR-----------PAAQEQLRYLG---E-----------QIQ  156 (461)
Q Consensus       102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R-----------~aA~eQL~~~a---~-----------~~~  156 (461)
T Consensus         2 ~iaiyGKGGIGKSTtsaNlsaaLA~-~GkkVl~IGcDpk~DsT~~L~g~~~~tvld~l~~~~~~~~~~~~edvi~~G~~g   80 (271)
T CHL00072          2 KIAVYGKGGIGKSTTSCNISIALAR-RGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLQSKDYHYEDVWPEDVIYKGYGG   80 (271)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCC
T ss_conf             6999789854485889999999998-799799978997377774006998885999997537873216499998527788


Q ss_pred             CCCCCC---CCCC----HHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH--HCC
Q ss_conf             742223---3210----368999999999974-158869983344222112468999999851385110003101--112
Q gi|254780711|r  157 VDTLEV---IPEQ----SPEKIAIRATQSARD-GGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADA--LTG  226 (461)
Q Consensus       157 v~~~~~---~~~~----dp~~i~~~a~~~a~~-~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da--~~G  226 (461)
T Consensus        81 i~cvEaGGPepGvGCaGrgi~~~i~lL~~l~~~~d~D~V~yDvlgDVVCGGFa~-Pi----~--~Ad~~~iVts~e~mal  153 (271)
T CHL00072         81 VDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFYEYDVILFDVLGDVVCGGFAA-PL----N--YADYCIIITDNGFDAL  153 (271)
T ss_pred             CEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC-CC----C--CCCEEEEEECCCHHHH
T ss_conf             466543899988777886519999999973762138889994477655654567-50----0--0888999956708899


Q ss_pred             HHHHHHHHHHHH---H--CCCCCEEEEECCCCCCCCHHHH-HHHHHCCCHH
Q ss_conf             256888898876---3--5844077641157663303677-7888478730
Q gi|254780711|r  227 QDAVHLARNFDK---I--VDLTGIILTRMDGDGRGGAALS-MRTVTGKPIK  271 (461)
Q Consensus       227 q~a~~~a~~F~~---~--~~i~giIlTKlD~~akgG~als-~~~~~~~PI~  271 (461)
T Consensus       154 yaANnI~~~i~~~a~~~~~rl~GiI~N~~~~----~~~v~~fa~~~g~~~i  200 (271)
T CHL00072        154 FAANRIAASVREKARTHPLRLAGLVGNRTSK----RDLIDKYVEACPMPVL  200 (271)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEECCCCC----HHHHHHHHHHCCCCEE
T ss_conf             9999999999997304686444365226883----7899999997399669