HHsearch alignment for GI: 254780711 and conserved domain: COG0486
>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=96.48 E-value=0.029 Score=37.45 Aligned_cols=178 Identities=19% Similarity=0.262 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 99999999871877421000258841899623443334688999999998614895078205422100477999985103
Q gi|254780711|r 76 KIVHDELVEVLGKESIELDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQI 155 (461)
Q Consensus 76 kiv~~eL~~lLg~~~~~l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~ 155 (461)
T Consensus 195 ~~~~~~l~~ll~~~~~g~ilr~--G~kvvIiG~PNvGKSSLLN----aL~~---~d~AIVT------------------- 246 (454)
T COG0486 195 EELIAELDELLATAKQGKILRE--GLKVVIIGRPNVGKSSLLN----ALLG---RDRAIVT------------------- 246 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC--CCEEEEECCCCCCHHHHHH----HHHC---CCCEEEC-------------------
T ss_conf 9999999999974442136645--8649998799886799999----8866---7866742-------------------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHH-HHHCCCCEEEEECCCCCCCHHHHHHHH---HHHHHHCCCCCCCCCCCHHCCHHHHH
Q ss_conf 47422233210368999999999-974158869983344222112468999---99985138511000310111225688
Q gi|254780711|r 156 QVDTLEVIPEQSPEKIAIRATQS-ARDGGYDAVILDTAGRNHINDSLMQEI---SEIKSLTNPHEILLVADALTGQDAVH 231 (461)
Q Consensus 156 ~v~~~~~~~~~dp~~i~~~a~~~-a~~~~~D~iiiDTaGR~~~d~~lm~El---~~i~~~~~p~e~~lV~da~~Gq~a~~ 231 (461)
T Consensus 247 dI~------GTT-----RDviee~i~i~G~pv~l~DTAGiRet~-d~VE~iGIeRs~~~i~~ADlvL~v~D~~~~~~~~d 314 (454)
T COG0486 247 DIA------GTT-----RDVIEEDINLNGIPVRLVDTAGIRETD-DVVERIGIERAKKAIEEADLVLFVLDASQPLDKED 314 (454)
T ss_pred CCC------CCC-----CCEEEEEEEECCEEEEEEECCCCCCCC-CHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHH
T ss_conf 899------974-----103789999898899998567766673-48999999999999985998999970887776011
Q ss_pred HHHHHHHHCCC---CCEEEEECCCCCCCC-HHHHHHHHHCCCHHHEE--CCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 88988763584---407764115766330-36777888478730261--586723210013688998773586
Q gi|254780711|r 232 LARNFDKIVDL---TGIILTRMDGDGRGG-AALSMRTVTGKPIKAIG--TGEKINDLENFFPDRIANRILGMG 298 (461)
Q Consensus 232 ~a~~F~~~~~i---~giIlTKlD~~akgG-~als~~~~~~~PI~fig--~GE~~~dle~F~p~~~~~riLGmg 298 (461)
T Consensus 315 ~--~~~~~~~~~~~~i~v~NK~DL~~~~~~~~~--~~~~~~~~i~iSa~t~~Gl~~L~~~i~~~~~~~-~~~~ 382 (454)
T COG0486 315 L--ALIELLPKKKPIIVVLNKADLVSKIELESE--KLANGDAIISISAKTGEGLDALREAIKQLFGKG-LGNQ 382 (454)
T ss_pred H--HHHHHCCCCCCEEEEEECHHCCCCCCCCHH--HCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC-CCCC
T ss_conf 7--788724368977999960211564321012--026788269998257657999999999998630-1565