HHsearch alignment for GI: 254780711 and conserved domain: COG1066

Probab=96.92  E-value=0.017  Score=39.33  Aligned_cols=106  Identities=24%  Similarity=0.278  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf             99999998718774210002588418996234433346889999999986148950782054221004779999851034
Q gi|254780711|r   77 IVHDELVEVLGKESIELDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQ  156 (461)
Q Consensus        77 iv~~eL~~lLg~~~~~l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~  156 (461)
T Consensus        77 tg~~EldRVLGGG~V-------~Gs~iLIgGdPGIGKSTLLLQva~~lA~~-~-~vLYVsGEE----S~~QiklRA~RL~  143 (456)
T COG1066          77 TGIEELDRVLGGGLV-------PGSVILIGGDPGIGKSTLLLQVAARLAKR-G-KVLYVSGEE----SLQQIKLRADRLG  143 (456)
T ss_pred             CCHHHHHHHHCCCCC-------CCCEEEECCCCCCCHHHHHHHHHHHHHHC-C-CEEEEECCC----CHHHHHHHHHHHC
T ss_conf             781888765367723-------66179973689877989999999998705-9-579996776----7899999999828


Q ss_pred             CCCC--CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
Q ss_conf             7422--233210368999999999974158869983344222112
Q gi|254780711|r  157 VDTL--EVIPEQSPEKIAIRATQSARDGGYDAVILDTAGRNHIND  199 (461)
Q Consensus       157 v~~~--~~~~~~dp~~i~~~a~~~a~~~~~D~iiiDTaGR~~~d~  199 (461)
T Consensus       144 ~~~~~l~l~aEt~~e~I----~~~l~~~~p~lvVIDSIQT~~s~~  184 (456)
T COG1066         144 LPTNNLYLLAETNLEDI----IAELEQEKPDLVVIDSIQTLYSEE  184 (456)
T ss_pred             CCCCCEEEEHHCCHHHH----HHHHHHCCCCEEEEECCCEECCCC
T ss_conf             99645577411289999----999985499789996541230263