HHsearch alignment for GI: 254780711 and conserved domain: COG1084
>COG1084 Predicted GTPase [General function prediction only].
Probab=96.19 E-value=0.13 Score=32.59 Aligned_cols=147 Identities=20% Similarity=0.209 Sum_probs=82.5
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 58841899623443334688999999998614895078205422100477999985103474222332103689999999
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRAT 176 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~ 176 (461)
T Consensus 166 p~~p-TivVaG~PNVGKSSlv~~lT~-------AkpEvA~-YPFT----------TK~i~vGh----------------- 209 (346)
T COG1084 166 PDLP-TIVVAGYPNVGKSSLVRKLTT-------AKPEVAP-YPFT----------TKGIHVGH----------------- 209 (346)
T ss_pred CCCC-EEEEECCCCCCHHHHHHHHHC-------CCCCCCC-CCCC----------CCCEEEEE-----------------
T ss_conf 9997-389856998758999988754-------8976678-8853----------36546765-----------------
Q ss_pred HHHHHCCCCEEEEECCCCCCCHHHHHHHHHH--HHHHCC-CCCCCCCCCHH--CCHHHHHHHHHHHHHCC----CCCEEE
Q ss_conf 9997415886998334422211246899999--985138-51100031011--12256888898876358----440776
Q gi|254780711|r 177 QSARDGGYDAVILDTAGRNHINDSLMQEISE--IKSLTN-PHEILLVADAL--TGQDAVHLARNFDKIVD----LTGIIL 247 (461)
Q Consensus 177 ~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~--i~~~~~-p~e~~lV~da~--~Gq~a~~~a~~F~~~~~----i~giIl 247 (461)
T Consensus 210 --fe~~~~R~QvIDTPGlLDRPl~ErN~IE~qAi~AL~hl~~~IlF~~D~Se~cgy~lE~Q~~L~~eIk~~f~~p~v~V~ 287 (346)
T COG1084 210 --FERGYLRIQVIDTPGLLDRPLEERNEIERQAILALRHLAGVILFLFDPSETCGYSLEEQISLLEEIKELFKAPIVVVI 287 (346)
T ss_pred --EECCCCEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf --504870589842886457885773689999999999742858999768500289999999999999985388769997
Q ss_pred EECCCCCCCC---HHHHHHHHHCC-CHHHEECCCCCCC
Q ss_conf 4115766330---36777888478-7302615867232
Q gi|254780711|r 248 TRMDGDGRGG---AALSMRTVTGK-PIKAIGTGEKIND 281 (461)
Q Consensus 248 TKlD~~akgG---~als~~~~~~~-PI~fig~GE~~~d 281 (461)
T Consensus 288 nK~D~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 325 (346)
T COG1084 288 NKIDIADEEKLEEIEASVLEEGGEEPLKISATKGCGLD 325 (346)
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH
T ss_conf 41012466678999999876326554313543000178