HHsearch alignment for GI: 254780711 and conserved domain: COG1102
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism].
Probab=96.13 E-value=0.015 Score=39.66 Aligned_cols=76 Identities=36% Similarity=0.491 Sum_probs=48.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCC--CCCCCCCHHH---HHHHHHH
Q ss_conf 8996234433346889999999986148950782054221004779999851034742--2233210368---9999999
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDT--LEVIPEQSPE---KIAIRAT 176 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~--~~~~~~~dp~---~i~~~a~ 176 (461)
T Consensus 2 ~ItIsG~pGsG~TTva~~lAe~~----gl~-~vsaG~iFR~~A~e--------~gmsl~ef~~~AE~~p~iD~~iD~rq~ 68 (179)
T COG1102 2 VITISGLPGSGKTTVARELAEHL----GLK-LVSAGTIFREMARE--------RGMSLEEFSRYAEEDPEIDKEIDRRQK 68 (179)
T ss_pred EEEECCCCCCCCHHHHHHHHHHH----CCC-EEECCHHHHHHHHH--------CCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 79961799997027999999982----971-56212799999998--------399999999987519216699889999
Q ss_pred HHHHHCCCCEEEEECCCCC
Q ss_conf 9997415886998334422
Q gi|254780711|r 177 QSARDGGYDAVILDTAGRN 195 (461)
Q Consensus 177 ~~a~~~~~D~iiiDTaGR~ 195 (461)
T Consensus 69 e~a~--~~nvVl---egrL 82 (179)
T COG1102 69 ELAK--EGNVVL---EGRL 82 (179)
T ss_pred HHHH--CCCEEE---HHHH
T ss_conf 9987--289587---0045